RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TEX35Q5T0J7 233 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ERMARDQ5T6L9 678 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 LRRC8DQ7L1W4 858 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CCDC89Q8N998 374 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CLP1Q92989 425 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 RANBP9Q96S59 729 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 MRPL9Q9BYD2 267 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 SLC24A2Q9UI40 661 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 LZTS1Q9Y250 596 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 UTP11Q9Y3A2 253 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 IRAK3Q9Y616 596 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TRPA1O75762 1119 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ECEL1O95672 775 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 AGTP01019 485 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 DHRS4L1P0CG22 281 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 RALAP11233 206 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 LMO2P25791 158 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PCSK1P29120 753 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 RDXP35241 583 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 FLT3P36888 993 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 GNL1P36915 607 aaPredicted RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 EPHA5P54756 1037 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CDH8P55286 799 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 DMTNQ08495 405 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PPIDQ08752 370 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 TIGD5Q53EQ6 642 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 EGFL6Q8IUX8 553 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CNTN4Q8IWV2 1026 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.512e-8■□□□□ 9.3
PRPF4B-201ENST00000337659 SENP8Q96LD8 212 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PPP1R2P1Q96PQ5 205 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 C11orf70Q9BRQ4 267 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 POPDC2Q9HBU9 364 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 ARNT2Q9HBZ2 717 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 METTL5Q9NRN9 209 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 MTRRQ9UBK8 725 aa5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 PIN4Q9Y237 131 aaKnown RBP5.6□□□□□ -1.51
PRPF4B-201ENST00000337659 CEP104O60308 925 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 F9P00740 461 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 KRT5P13647 590 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 PPP3CCP48454 512 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 FAAP100Q0VG06 881 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 BFSP2Q13515 415 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 CNKSR3Q6P9H4 555 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 SLC39A5Q6ZMH5 540 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 PCDH19Q8TAB3 1148 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 ATXN2LQ8WWM7 1075 aaKnown RBP5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 LMLNQ96KR4 655 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 ATP6V1G3Q96LB4 118 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 VN1R3Q9BXE9 311 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 EPC1Q9H2F5 836 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 EPB41L5Q9HCM4 733 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 SMARCAL1Q9NZC9 954 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 DNMT3BQ9UBC3 853 aaKnown RBP5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 PES1O00541 588 aaKnown RBP5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 TRIM66O15016 1216 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 TTC4O95801 387 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 CLCNKBP51801 687 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 ACVR1Q04771 509 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 TFDP2Q14188 446 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 PTPROQ16827 1216 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 ZNF783Q6ZMS7 281 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 DNAAF5Q86Y56 855 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 RNF169Q8NCN4 708 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 OR10T2Q8NGX3 314 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 CD99L2Q8TCZ2 262 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 PEX13Q92968 403 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 BTBD6Q96KE9 485 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 FAM84AQ96KN4 292 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 KCTD15Q96SI1 283 aaPredicted RBP5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 HTATIP2Q9BUP3 242 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 GOLPH3Q9H4A6 298 aa5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 HMX1Q9NP08 348 aaPredicted RBP5.59□□□□□ -1.51
PRPF4B-201ENST00000337659 CCDC189A1A4V9 331 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 C10orf142B7Z368 130 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 OPA1O60313 960 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 GRK4P32298 578 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 CXCR5P32302 372 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 ADRA1AP35348 466 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 BYSLQ13895 437 aaKnown RBP5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 HADHQ16836 314 aaKnown RBP5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 AADACL2Q6P093 401 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 C6orf89Q6UWU4 347 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 RXFP2Q8WXD0 754 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 CPT1BQ92523 772 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 VAT1Q99536 393 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 ATP8A1Q9Y2Q0 1164 aa5.59□□□□□ -1.52
PRPF4B-201ENST00000337659 ERI2A8K979 691 aaKnown RBP5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 M0QYV0 167 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 M0QZ92 97 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 TRDMT1O14717 391 aaKnown RBP5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 CD9P21926 228 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 POLD2P49005 469 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 PSMC1P62191 440 aaKnown RBP5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 ARID5AQ03989 594 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 NIPAL4Q0D2K0 466 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 BPTFQ12830 3046 aa5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 ELAVL2Q12926 359 aaKnown RBP5.58□□□□□ -1.52
PRPF4B-201ENST00000337659 NR1H3Q13133 447 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms