RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SYNDIG1Q9H7V2 258 aa13.46□□□□□ -0.26
HLCS-201ENST00000336648 PRR23AA6NEV1 266 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 PIK3R1P27986 724 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 PPP4CP60510 307 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 MGAT5Q09328 741 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 BNIPLQ7Z465 357 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 FBXO33Q7Z6M2 555 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ENKURQ8TC29 256 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ATP8B4Q8TF62 1192 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 CEP44Q9C0F1 390 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 GPR75-ASB3A0A0A6YYF3 556 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 FAM220BPB1ANY3 271 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 CES2O00748 559 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 AP1G2O75843 785 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 PROSCO94903 275 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 MAPTP10636 758 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 CCT8P50990 548 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ITGA1P56199 1179 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ITGB3BPQ13352 177 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 DCTN2Q13561 401 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 RNF180Q86T96 592 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 MRPS31Q92665 395 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 CAVIN3Q969G5 261 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 RNFT2Q96EX2 444 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 TBCBQ99426 244 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 NMRK2Q9NPI5 230 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 TRPM5Q9NZQ8 1165 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 HACL1Q9UJ83 578 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 SNX13Q9Y5W8 968 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 ZNF862O60290 1169 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 OASLQ15646 514 aaKnown RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 DENND5BQ6ZUT9 1274 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 HERC6Q8IVU3 1022 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 MMADHCQ9H3L0 296 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 DPP7Q9UHL4 492 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 TULP4Q9NRJ4 1543 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 MED26O95402 600 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 CLPTM1O96005 669 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 CPA3P15088 417 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 TFE3P19532 575 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 CPA2P48052 419 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 STYK1Q6J9G0 422 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 UXS1Q8NBZ7 420 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ASB2Q96Q27 587 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 PAFAH2Q99487 392 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 VTA1Q9NP79 307 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 SHOC2Q9UQ13 582 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ZBTB22O15209 634 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ZNF135P52742 658 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 PRKAA1Q13131 559 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 AKIRIN2Q53H80 203 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 C2CD6Q53TS8 623 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 WDR49Q8IV35 697 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 ZNF513Q8N8E2 541 aaPredicted RBP13.45□□□□□ -0.26
HLCS-201ENST00000336648 ANKRD6Q9Y2G4 727 aa13.45□□□□□ -0.26
HLCS-201ENST00000336648 GLP2RO95838 553 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ALDH7A1P49419 539 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 SREBF2Q12772 1141 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 PWP1Q13610 501 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 FAM98BQ52LJ0 330 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 ZNF618Q5T7W0 954 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 CCDC80Q76M96 950 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ZDHHC17Q8IUH5 632 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 FAM120BQ96EK7 910 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 RMND5BQ96G75 393 aaPredicted RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 V9GYQ6 96 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 C15orf38-AP3S2A0A0A6YYH1 394 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 BCL10O95999 233 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 SCTRP47872 440 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 CSE1LP55060 971 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 ANTXR2P58335 489 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 RPS7P62081 194 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 ZFP1Q6P2D0 407 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ARPINQ7Z6K5 226 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 C11orf74Q86VG3 221 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 STX12Q86Y82 276 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 APOL4Q9BPW4 351 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 RXFP1Q9HBX9 757 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 PCDH9Q9HC56 1237 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 E9PBE3 544 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 SKAP2O75563 359 aaPredicted RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 FASP25445 335 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 SERPINB5P36952 375 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ELAVL2Q12926 359 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 SPOCD1Q6ZMY3 1216 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 NANOGNBQ7Z5D8 188 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 AGBL3Q8NEM8 1001 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 SMAD5Q99717 465 aaKnown RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 BTBD7Q9P203 1132 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 DNAJC16Q9Y2G8 782 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 ABCC3O15438 1527 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 CYP11B1P15538 503 aa13.44□□□□□ -0.26
HLCS-201ENST00000336648 TCF7P36402 384 aaPredicted RBP13.44□□□□□ -0.26
HLCS-201ENST00000336648 ZNF57Q68EA5 555 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms