RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CCDC15Q0P6D6 951 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 C1orf228Q6PIY5 440 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 CFAP57Q96MR6 1250 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 FAM192AQ9GZU8 254 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 FBXO6Q9NRD1 293 aaPredicted RBP14.42□□□□□ -0.1
SF1-202ENST00000334944 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.42□□□□□ -0.1
SF1-202ENST00000334944 RBM47A0AV96 593 aaKnown RBP14.42□□□□□ -0.1
SF1-202ENST00000334944 CILPO75339 1184 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 ATP5HO75947 161 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 VAV1P15498 845 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 GRM1Q13255 1194 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 TMEM132DQ14C87 1099 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 SURF1Q15526 300 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 MDH1BQ5I0G3 518 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 RNASEH2BQ5TBB1 312 aaKnown RBP14.42□□□□□ -0.1
SF1-202ENST00000334944 FAXCQ5TGI0 409 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 RSAD2Q8WXG1 361 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 KCNN1Q92952 543 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 LENG1Q96BZ8 264 aaPredicted RBP14.42□□□□□ -0.1
SF1-202ENST00000334944 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 CLPTM1LQ96KA5 538 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 SMC6Q96SB8 1091 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 B3GNT5Q9BYG0 378 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 MAF1Q9H063 256 aa14.42□□□□□ -0.1
SF1-202ENST00000334944 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.42□□□□□ -0.1
SF1-202ENST00000334944 PLOD1Q02809 727 aaPredicted RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 CBX3Q13185 183 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 ACVR2BQ13705 512 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 BBS9Q3SYG4 887 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 TAPT1Q6NXT6 567 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 RINLQ6ZS11 566 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 ACOT1Q86TX2 421 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 CXorf38Q8TB03 319 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 BCO2Q9BYV7 579 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 ZNF518BQ9C0D4 1074 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 MIS12Q9H081 205 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 SETD4Q9NVD3 440 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 PRMT7Q9NVM4 692 aaPredicted RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 ARHGEF38Q9NXL2 777 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 USP18Q9UMW8 372 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 GSC2O15499 205 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 GAS2O43903 313 aaKnown RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 ASLP04424 464 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 YBX3P16989 372 aaKnown RBP eCLIP14.41□□□□□ -0.12e-9■■□□□ 14
SF1-202ENST00000334944 CDH5P33151 784 aaPredicted RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 RPL22P35268 128 aaKnown RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 GPD2P43304 727 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 AP1B1Q10567 949 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 CROCCP2Q86T23 111 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 SCUBE3Q8IX30 993 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 NETO2Q8NC67 525 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 RFWD2Q8NHY2 731 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 MIPOL1Q8TD10 442 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 NAT14Q8WUY8 206 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 C10orf82Q8WW14 230 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 CCDC77Q9BR77 488 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 EBF3Q9H4W6 596 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 CDHR5Q9HBB8 845 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 NGRNQ9NPE2 291 aaKnown RBP14.41□□□□□ -0.1
SF1-202ENST00000334944 TSPAN16Q9UKR8 245 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 STRIP2Q9ULQ0 834 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 KCNH4Q9UQ05 1017 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 SNX9Q9Y5X1 595 aa14.41□□□□□ -0.1
SF1-202ENST00000334944 F5H423 210 aaPredicted RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 H3BRB1 525 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 BOLA2-SMG1P6H3BVE0 249 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 MED7O43513 233 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 AVILO75366 819 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 DCTN3O75935 186 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 CDH6P55285 790 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 LMNB2Q03252 620 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 PPIL2Q13356 520 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 PRAMEF19Q5SWL8 479 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 LRRC38Q5VT99 294 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 BBOF1Q8ND07 529 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SLC35B2Q8TB61 432 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SPATA18Q8TC71 538 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 CPT1BQ92523 772 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 C18orf25Q96B23 403 aaPredicted RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 CENPKQ9BS16 269 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 TUT1Q9H6E5 874 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 DPP3Q9NY33 737 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 ARMCX1Q9P291 453 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 HEY1Q9Y5J3 304 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 SLC4A7Q9Y6M7 1214 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 TRIP11Q15643 1979 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 A0A0J9YVX5 310 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 TMEM63AO94886 807 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 PDGFRAP16234 1089 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 TFE3P19532 575 aaPredicted RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 GPX6P59796 221 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 EIF3EP60228 445 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 HIF1AQ16665 826 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 HADHQ16836 314 aaKnown RBP14.4□□□□□ -0.1
SF1-202ENST00000334944 MFSD4BQ5TF39 518 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 MAMDC4Q6UXC1 1216 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 FAM183BPQ6ZVS7 135 aa14.4□□□□□ -0.1
SF1-202ENST00000334944 CLNKQ7Z7G1 428 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms