RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 RPS6KB2Q9UBS0 482 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PSMD12O00232 456 aaPredicted RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 HAT1O14929 419 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ZBTB39O15060 712 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 C21orf2O43822 256 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 CAMTA2O94983 1202 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 TGDSO95455 350 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PTGER2P43116 358 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 QARSP47897 775 aaKnown RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 VBP1P61758 197 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 KLHL24Q6TFL4 600 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 MIER2Q8N344 545 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 SCAIQ8N9R8 606 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 MCEEQ96PE7 176 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PCDH9Q9HC56 1237 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 CDH9Q9ULB4 789 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ARHGEF33A8MVX0 844 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 RIPK2O43353 540 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 DYRK3O43781 588 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 FXR2P51116 673 aaKnown RBP eCLIP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ARHGDIBP52566 201 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 MDH1BQ5I0G3 518 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PDXDC2PQ6P474 469 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 KRT77Q7Z794 578 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 NOP9Q86U38 636 aaKnown RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ZDHHC17Q8IUH5 632 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ANKMY2Q8IV38 441 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 FBXO36Q8NEA4 188 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 TBCBQ99426 244 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PIH1D3Q9NQM4 214 aaKnown RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 M0QX08 132 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 APOC1P02654 83 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 PSMB9P28065 219 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 SDC2P34741 201 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 GP5P40197 560 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 CCNG2Q16589 344 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 ANKRD40Q6AI12 368 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 SCARA3Q6AZY7 606 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 HEATR4Q86WZ0 1026 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 OR6B3Q8NGW1 331 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 SLC30A5Q8TAD4 765 aa5.68□□□□□ -1.5
PTPRB-202ENST00000334414 THUMPD3Q9BV44 507 aaKnown RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 MARCOQ9UEW3 520 aaPredicted RBP5.68□□□□□ -1.5
PTPRB-202ENST00000334414 LOC110117498-PIK3R3F6TDL0 507 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 OPLAHO14841 1288 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 MDM4O15151 490 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 RECQL5O94762 991 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SEC24AO95486 1093 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CD4P01730 458 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TCN1P20061 433 aaPredicted RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SQLEQ14534 574 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PDK3Q15120 406 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ANKRD49Q8WVL7 239 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PIK3R3Q92569 461 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ZHX1-C8orf76Q96EF9 292 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 FAM118BQ9BPY3 351 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PNPLA8Q9NP80 782 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DDX18Q9NVP1 670 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TFCP2L1Q9NZI6 479 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TRPM5Q9NZQ8 1165 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 E9PCH4 1651 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DGAT1O75907 488 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PAICSP22234 425 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SPAG16Q8N0X2 631 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 EPS8L3Q8TE67 593 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 EPB41L4BQ9H329 900 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 RAB6BQ9NRW1 208 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TJP2Q9UDY2 1190 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 NDUFAF1Q9Y375 327 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 KLHL18O94889 574 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SERPINA6P08185 405 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 RCVRNP35243 200 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SMIM11AP58511 58 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PACS1Q6VY07 963 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SFRP1Q8N474 314 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 LEMD2Q8NC56 503 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 C15orf40Q8WUR7 153 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PPP1R10Q96QC0 940 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DSN1Q9H410 356 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TBCCD1Q9NVR7 557 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 DNAJA2O60884 412 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TPBGLP0DKB5 382 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PHKG2P15735 406 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SLC27A3Q5K4L6 730 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PLA2G4FQ68DD2 849 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PROSER1Q86XN7 944 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ERI2A8K979 691 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 HACD1B0YJ81 288 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 ALOX12P18054 663 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 PEX3P56589 373 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CSNK2BP67870 215 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 IL5RAQ01344 420 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 TKFCQ3LXA3 575 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SYCE2Q6PIF2 218 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CXXC5Q7LFL8 322 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 LARGE2Q8N3Y3 721 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 NSMCE2Q96MF7 247 aa5.67□□□□□ -1.5
PTPRB-202ENST00000334414 CDC42EP4Q9H3Q1 356 aaKnown RBP5.67□□□□□ -1.5
PTPRB-202ENST00000334414 SNAP23O00161 211 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms