RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 TYROBPO43914 113 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 KCNJ13O60928 360 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 MAGEA4P43358 317 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 IRX4P78413 519 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CYP4F22Q6NT55 531 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 TMC5Q6UXY8 1006 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 IGFN1Q86VF2 1251 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 GALNT13Q8IUC8 556 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ZNF276Q8N554 614 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 EFCAB3Q8N7B9 438 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 SNF8Q96H20 258 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 FAM20AQ96MK3 541 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CCDC77Q9BR77 488 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 PPARGC1AQ9UBK2 798 aaKnown RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ASIC3Q9UHC3 531 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CPQQ9Y646 472 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 NAV1Q8NEY1 1877 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 KLRG2A4D1S0 409 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 PDXKO00764 312 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CLASP2O75122 1294 aaKnown RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 COL6A1P12109 1028 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 NAGAP17050 411 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 GABRB3P28472 473 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 SOX5P35711 763 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CPOXP36551 454 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ITGA8P53708 1063 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 CDH15P55291 814 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 STAT4Q14765 748 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 LLGL1Q15334 1064 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ECM1Q16610 540 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 MOGQ16653 247 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 FGD3Q5JSP0 725 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 SETD3Q86TU7 594 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 PRPF39Q86UA1 669 aaKnown RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 TTC13Q8NBP0 860 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ADAMTS16Q8TE57 1224 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 SLCO2A1Q92959 643 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 ZNF486Q96H40 463 aaPredicted RBP12.26□□□□□ -0.45
SHMT2-201ENST00000328923 DHRS9Q9BPW9 319 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 IMPG2Q9BZV3 1241 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 HIPK3Q9H422 1215 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 MCM9Q9NXL9 1143 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 WHRNQ9P202 907 aa12.26□□□□□ -0.45
SHMT2-201ENST00000328923 EXOC1LA0A1B0GW35 172 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ANKRD62A6NC57 917 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ENPP3O14638 875 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 CALUO43852 315 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 TDP2O95551 362 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 CTRB1P17538 263 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ATP2B4P23634 1241 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 SLC18A1P54219 525 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 STILQ15468 1287 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 FAM182AQ5T1J6 154 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 FAM91A1Q658Y4 838 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 CTRB2Q6GPI1 263 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 EEPD1Q7L9B9 569 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 SLC51BQ86UW2 128 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 BRSK2Q8IWQ3 736 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 FEM1CQ96JP0 617 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ALPK1Q96QP1 1244 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 HOXD1Q9GZZ0 328 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 MANSC1Q9H8J5 431 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 GCNT4Q9P109 453 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ANKMY1Q9P2S6 941 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 GGA1Q9UJY5 639 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 HOXC11O43248 304 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 WEE1P30291 646 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 KRT6CP48668 564 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 KRT17Q04695 432 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 HSPA14Q0VDF9 509 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 TCHHL1Q5QJ38 904 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 PERM1Q5SV97 790 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 UTS2BQ765I0 119 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 GPR141Q7Z602 305 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 NPLOC4Q8TAT6 608 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 PMEPA1Q969W9 287 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 DCPSQ96C86 337 aaKnown RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 CIB1Q99828 191 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 RPF2Q9H7B2 306 aaKnown RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 CAAP1Q9H8G2 361 aa12.25□□□□□ -0.45
SHMT2-201ENST00000328923 AJAP1Q9UKB5 411 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-201ENST00000328923 ANKRD31Q8N7Z5 1873 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ILVBLA1L0T0 632 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 EDIL3O43854 480 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 FKBP9O95302 570 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PLA2G4BP0C869 781 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 STAT3P40763 770 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 ADCY7P51828 1080 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PHC1P78364 1004 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 CDK18Q07002 472 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 NIPAL4Q0D2K0 466 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 KNOP1Q1ED39 458 aaKnown RBP12.24□□□□□ -0.45
SHMT2-201ENST00000328923 BMT2Q1RMZ1 405 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PGS1Q32NB8 556 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 PPM1LQ5SGD2 360 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 SEL1L2Q5TEA6 688 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 AGAP7PQ5VUJ5 663 aa12.24□□□□□ -0.45
SHMT2-201ENST00000328923 UBE2UQ5VVX9 321 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms