RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 KIAA1257Q9ULG3 409 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 SNX10Q9Y5X0 201 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 A0A1W2PPM1 405 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 ADRA1DP25100 572 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 OGDHQ02218 1023 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 FAAP100Q0VG06 881 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 PDK1Q15118 436 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 MUM1Q2TAK8 710 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 MMEL1Q495T6 779 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 PLEKHA7Q6IQ23 1121 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 IFT43Q96FT9 208 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 RSRC1Q96IZ7 334 aaKnown RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 LRRC19Q9H756 370 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 ACSS2Q9NR19 701 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 MYO18AQ92614 2054 aaKnown RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 MANSC4A6NHS7 340 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 SREBF2Q12772 1141 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 CHI3L2Q15782 390 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 QPCTQ16769 361 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 FAM110CQ1W6H9 321 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 ACCSLQ4AC99 568 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 EXOC3L1Q86VI1 746 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 ZNF410Q86VK4 478 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 ATP6V1E2Q96A05 226 aa16.59■□□□□ 0.25
SYNM-201ENST00000328642 ZBED3Q96IU2 234 aaPredicted RBP16.59■□□□□ 0.25
SYNM-201ENST00000328642 HAUS5O94927 633 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 MT-CO1P00395 513 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 COPS2P61201 443 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 MORF4L2Q15014 288 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 ANO4Q32M45 955 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 SH3D19Q5HYK7 790 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 FAM171A1Q5VUB5 890 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 ANKRD22Q5VYY1 191 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 WDR75Q8IWA0 830 aaKnown RBP16.58■□□□□ 0.25
SYNM-201ENST00000328642 TCP10LQ8TDR4 215 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 GIPC2Q8TF65 315 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 FZD8Q9H461 694 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 TMPRSS4Q9NRS4 437 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 SLC27A5Q9Y2P5 690 aa16.58■□□□□ 0.25
SYNM-201ENST00000328642 WDR27A2RRH5 827 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 MGAT1P26572 445 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 PBX3P40426 434 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 GAD2Q05329 585 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 USP10Q14694 798 aaKnown RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 CTXN3Q4LDR2 81 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 SLC39A12Q504Y0 691 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 CD302Q8IX05 232 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 ERLEC1Q96DZ1 483 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 FBXL18Q96ME1 805 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 PHTF1Q9UMS5 762 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 ARL2BPQ9Y2Y0 163 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 MYH4Q9Y623 1939 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 TIAM2Q8IVF5 1701 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 CILPO75339 1184 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 UBOX5O94941 541 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 TRUB2O95900 331 aaKnown RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 SNRPAP09012 282 aaKnown RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 ODC1P11926 461 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 BGNP21810 368 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 IL1R2P27930 398 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 GDF10P55107 478 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 NR1H3Q13133 447 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 PTK6Q13882 451 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 NOL9Q5SY16 702 aaKnown RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 SPOCK2Q92563 424 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 PIWIL1Q96J94 861 aaKnown RBP16.58■□□□□ 0.24
SYNM-201ENST00000328642 TKTL2Q9H0I9 626 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 STXBP5LQ9Y2K9 1186 aa16.58■□□□□ 0.24
SYNM-201ENST00000328642 CCT8L1PA6NM43 557 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 TGM2P21980 687 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 ZNF235Q14590 738 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 OLFML2BQ68BL8 750 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 XYLT1Q86Y38 959 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 NCAPGQ9BPX3 1015 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 RHOBTB2Q9BYZ6 727 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 SDCBP2Q9H190 292 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 N4BP2Q86UW6 1770 aaPredicted RBP16.57■□□□□ 0.24
SYNM-201ENST00000328642 TRAPPC3O43617 180 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 FAM155BO75949 473 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 ZNF143P52747 638 aaPredicted RBP16.57■□□□□ 0.24
SYNM-201ENST00000328642 ATG16L1Q676U5 607 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 BBS5Q8N3I7 341 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 GABPB2Q8TAK5 448 aaPredicted RBP16.57■□□□□ 0.24
SYNM-201ENST00000328642 FAM129AQ9BZQ8 928 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 HAO1Q9UJM8 370 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.57■□□□□ 0.24
SYNM-201ENST00000328642 SLC15A5A6NIM6 579 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 APOC4-APOC2K7ER74 178 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 RNF103O00237 685 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 APOC2P02655 101 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 RAB6CQ53S08 254 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 C9orf57Q5W0N0 161 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 RAB6CQ9H0N0 254 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 PRDM12Q9H4Q4 367 aa16.57■□□□□ 0.24
SYNM-201ENST00000328642 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
SYNM-201ENST00000328642 CA9Q16790 459 aa16.56■□□□□ 0.24
SYNM-201ENST00000328642 TTC1Q99614 292 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms