RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 PDPK2PQ6A1A2 396 aa13.71□□□□□ -0.22
TRAK1-201ENST00000327628 FAM45BPQ6NSW5 357 aa13.71□□□□□ -0.22
TRAK1-201ENST00000327628 ST13P5Q8NFI4 369 aaPredicted RBP13.71□□□□□ -0.22
TRAK1-201ENST00000327628 UBE2E3Q969T4 207 aa13.71□□□□□ -0.22
TRAK1-201ENST00000327628 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.22
TRAK1-201ENST00000327628 MS4A14Q96JA4 679 aa13.71□□□□□ -0.22
TRAK1-201ENST00000327628 TECPR2O15040 1411 aa13.71□□□□□ -0.22
TRAK1-201ENST00000327628 KLHL41O60662 606 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 GPC1P35052 558 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 HSD17B3P37058 310 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 DNAJC3Q13217 504 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 FBXO47Q5MNV8 452 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 LRRC71Q8N4P6 559 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SMARCD1Q96GM5 515 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SPATA17Q96L03 361 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 CPNE1Q99829 537 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 THUMPD3Q9BV44 507 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 CRYL1Q9Y2S2 319 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 A0A087X1B8 175 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 KATNA1O75449 491 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 PABPC1P11940 636 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZFP1Q6P2D0 407 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 GPR141Q7Z602 305 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZNF655Q8N720 491 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 AGR3Q8TD06 166 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZNF668Q96K58 619 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 PPP1R10Q96QC0 940 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ENTPD7Q9NQZ7 604 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 PHTF1Q9UMS5 762 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 USP18Q9UMW8 372 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 A0A0G2JLW4 131 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 FAM220BPB1ANY3 271 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 TRDMT1O14717 391 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SLC9A3R1O14745 358 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 CD3EAPO15446 510 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SUPT7LO94864 414 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SERPINF2P08697 491 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 MYL4P12829 197 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 TUFMP49411 452 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ITGA1P56199 1179 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SLC30A9Q6PML9 568 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZNF720Q7Z2F6 126 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ABRAQ8N0Z2 381 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 AADATQ8N5Z0 425 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 TTLL13PA6NNM8 815 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 MSCO60682 206 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 POLR2LP62875 67 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ERMARDQ5T6L9 678 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 FBXO36Q8NEA4 188 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 RFWD2Q8NHY2 731 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 RUSC1Q9BVN2 902 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 TMBIM4Q9HC24 238 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 RUVBL2Q9Y230 463 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 HPSEQ9Y251 543 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 CLTCQ00610 1675 aaKnown RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 RNF103O00237 685 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 KPNA5O15131 536 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ZNF185O15231 689 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 FGF10O15520 208 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 MYCP01106 439 aaPredicted RBP13.7□□□□□ -0.22
TRAK1-201ENST00000327628 AMHP03971 560 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 PCSK2P16519 638 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 AVPR1AP37288 418 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 RAB14P61106 215 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 MPP3Q13368 585 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SLC29A2Q14542 456 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 ATAD3BQ5T9A4 648 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 BLOC1S5Q8TDH9 187 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 BTN2A2Q8WVV5 523 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 THAP2Q9H0W7 228 aa13.7□□□□□ -0.22
TRAK1-201ENST00000327628 SF3B1O75533 1304 aaKnown RBP eCLIP13.69□□□□□ -0.225e-6■■■■■ 88.6
TRAK1-201ENST00000327628 IQSEC2Q5JU85 1478 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 SNAP23O00161 211 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 KCNQ2O43526 872 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 IGSF6O95976 241 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 OR56A5P0C7T3 313 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 UQCRBP14927 111 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 RPL3P39023 403 aaKnown RBP13.69□□□□□ -0.22
TRAK1-201ENST00000327628 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
TRAK1-201ENST00000327628 CD151P48509 253 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 NUDT2P50583 147 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 LYPLAL1Q5VWZ2 237 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 IYDQ6PHW0 289 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 RBM43Q6ZSC3 357 aaKnown RBP13.69□□□□□ -0.22
TRAK1-201ENST00000327628 NYAP1Q6ZVC0 841 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 MTSS1LQ765P7 747 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 USP6NLQ92738 828 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 SYNDIG1Q9H7V2 258 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 L2HGDHQ9H9P8 463 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 PAIP2BQ9ULR5 123 aaKnown RBP13.69□□□□□ -0.22
TRAK1-201ENST00000327628 PCDHA3Q9Y5H8 950 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 CCDC189A1A4V9 331 aa13.69□□□□□ -0.22
TRAK1-201ENST00000327628 SEC24DO94855 1032 aaPredicted RBP13.69□□□□□ -0.22
TRAK1-201ENST00000327628 ALDH2P05091 517 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms