RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 EFCAB10A6NFE3 127 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 OPLAHO14841 1288 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 SSNA1O43805 119 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 MAGP20916 626 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CALB2P22676 271 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 HARS2P49590 506 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 BCAP31P51572 246 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CNTN1Q12860 1018 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 UGP2Q16851 508 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CACHD1Q5VU97 1274 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PDPK2PQ6A1A2 396 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 IRGCQ6NXR0 463 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 DENND1BQ6P3S1 775 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 NEK10Q6ZWH5 1172 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PSMA8Q8TAA3 256 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 UBP1Q9NZI7 540 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 RD3Q7Z3Z2 195 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 STRA8Q7Z7C7 330 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 RIC8BQ9NVN3 520 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ERI2A8K979 691 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 NCKAP1LP55160 1127 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TRADDQ15628 312 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 B3GNT6Q6ZMB0 384 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 FEZF2Q8TBJ5 459 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 FAM45AQ8TCE6 357 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 HPS1Q92902 700 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 GSG1L2A8MUP6 293 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 SGPL1O95470 568 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ALDH1A3P47895 512 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ELF3P78545 371 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 SDE2Q6IQ49 451 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PRUNE1Q86TP1 453 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 RNASE11Q8TAA1 199 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 PHF21BQ96EK2 531 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CACNA1IQ9P0X4 2223 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CLASP1Q7Z460 1538 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 QRICH2Q9H0J4 1663 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TBKBP1A7MCY6 615 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 GPD1P21695 349 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 MTTPP55157 894 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 USP49Q70CQ1 688 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 BHLHE22Q8NFJ8 381 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 ZNF333Q96JL9 665 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 THAP2Q9H0W7 228 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CHST12Q9NRB3 414 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PSMD3O43242 534 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 H2AFXP16104 143 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 THPOP40225 353 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ATP2C1P98194 919 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 PLCL1Q15111 1095 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 GATAD2AQ86YP4 633 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 NT5C1AQ9BXI3 368 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 PRR12Q9ULL5 1215 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 IL6P05231 212 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ATP6V1C1P21283 382 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 HERVK_113P62684 666 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 PIGHQ14442 188 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 PHKG1Q16816 387 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ELMO3Q96BJ8 720 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 UVRAGQ9P2Y5 699 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TTLL13PA6NNM8 815 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CAMK2GQ13555 558 aaPredicted RBP8.12□□□□□ -1.11
CIITA-201ENST00000324288 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 ADSSL1Q8N142 457 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 RORBQ92753 470 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 TADA1Q96BN2 335 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 GPRASP2Q96D09 838 aa8.12□□□□□ -1.11
CIITA-201ENST00000324288 CENPXA8MT69 81 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 KATNA1O75449 491 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 FAM153BP0C7A2 387 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 SCARF1Q14162 830 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 DGUOKQ16854 277 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 FAM153CQ494X1 144 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 ANKS6Q68DC2 871 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 SNX32Q86XE0 403 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 RSPH1Q8WYR4 309 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 VPS33AQ96AX1 596 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 PAFAH2Q99487 392 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 PACSIN3Q9UKS6 424 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 RWDD3Q9Y3V2 267 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 PPP2R3BQ9Y5P8 575 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 ZMPSTE24O75844 475 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 SEC24AO95486 1093 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 MBL2P11226 248 aaPredicted RBP8.11□□□□□ -1.11
CIITA-201ENST00000324288 UCHL3P15374 230 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 HPGDP15428 266 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 DSG3P32926 999 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 PTGER2P43116 358 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 MAPKAPK2P49137 400 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 CCT8P50990 548 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 STARD3Q14849 445 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 OOSP2Q86WS3 158 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 TCAIMQ8N3R3 496 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 POC5Q8NA72 575 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 TRIM9Q9C026 710 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 COMMD8Q9NX08 183 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 MYRFQ9Y2G1 1151 aa8.11□□□□□ -1.11
CIITA-201ENST00000324288 SDR42E2A6NKP2 422 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms