RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 DUSP4Q13115 394 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 STARD3Q14849 445 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 C14orf28Q4W4Y0 310 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 KCNT1Q5JUK3 1230 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 PPP4R3AQ6IN85 833 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 CCDC73Q6ZRK6 1079 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 TGIF2LYQ8IUE0 185 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 KSR1Q8IVT5 923 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 CHDHQ8NE62 594 aaPredicted RBP7.1□□□□□ -1.27
CSTF3-201ENST00000323959 CRYGNQ8WXF5 182 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 SNX19Q92543 992 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 AIFM3Q96NN9 605 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 NFKBIZQ9BYH8 718 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 CUEDC2Q9H467 287 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 C6orf50Q9HD87 102 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 DISC1Q9NRI5 854 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 TPX2Q9ULW0 747 aaKnown RBP7.1□□□□□ -1.27
CSTF3-201ENST00000323959 PCDHB6Q9Y5E3 794 aa7.1□□□□□ -1.27
CSTF3-201ENST00000323959 GOLGA6L4A6NEF3 574 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 ZNF891A8MT65 544 aaPredicted RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 OAZ2O95190 189 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 NFICP08651 508 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 GCFC2P16383 781 aaKnown RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 RXRAP19793 462 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 RPL9P32969 192 aaKnown RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 TPMTP51580 245 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 CLCNKBP51801 687 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 BCAT1P54687 386 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 PTENP60484 403 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 KDSRQ06136 332 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 LAMTOR4Q0VGL1 99 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 AP3B2Q13367 1082 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SEPT6Q14141 434 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 TFDP1Q14186 410 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 DHCR24Q15392 516 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 TAF12Q16514 161 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 AMHR2Q16671 573 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SLC45A4Q5BKX6 768 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 PLA2G4DQ86XP0 818 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 C2orf15Q8WU43 125 aaKnown RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 GOLPH3LQ9H4A5 285 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 UXTQ9UBK9 157 aaPredicted RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 CNTN5O94779 1100 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 COBLL1Q53SF7 1204 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 FOXR2Q6PJQ5 311 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SHC4Q6S5L8 630 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SARM1Q6SZW1 724 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 TMEM150AQ86TG1 271 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 PRIMA1Q86XR5 153 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 MAPK15Q8TD08 544 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 GPBAR1Q8TDU6 330 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 DDX12PQ92771 950 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 CPB2Q96IY4 423 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SGPP1Q9BX95 441 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SEMA6CQ9H3T2 930 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 CD93Q9NPY3 652 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 RRAGDQ9NQL2 400 aaPredicted RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 SLC38A7Q9NVC3 462 aa7.09□□□□□ -1.27
CSTF3-201ENST00000323959 NAP1L2Q9ULW6 460 aaPredicted RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.09□□□□□ -1.27
CSTF3-201ENST00000323959 A0A1B0GUA9 196 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 MTMR11A4FU01 709 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 I3L4J1 428 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TBX3O15119 743 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ADH5P11766 374 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 BPIP17213 487 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ARF4P18085 180 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CLCN1P35523 988 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ATP1A2P50993 1020 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SRSF6Q13247 344 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TTC38Q5R3I4 469 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 C10orf76Q5T2E6 689 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TCTN3Q6NUS6 607 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SFTPA1Q8IWL2 248 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 OR4C6Q8NH72 309 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SH3RF2Q8TEC5 729 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 NAP1L5Q96NT1 182 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CCSER1Q9C0I3 900 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 GDPD2Q9HCC8 539 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 NCKIPSDQ9NZQ3 722 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 VPS54Q9P1Q0 977 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SEC63Q9UGP8 760 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 A0A1W2PQC6 194 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TBC1D3BA6NDS4 549 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 KCNJ18B7U540 433 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 HOXC11O43248 304 aaPredicted RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SIGLEC6O43699 453 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 STBD1O95210 358 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CYP3A4P08684 503 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CDC25BP30305 580 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 GAD2Q05329 585 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 SMARCB1Q12824 385 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 FAM173BQ6P4H8 233 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TERB1Q8NA31 727 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 ZNF577Q9BSK1 485 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 TNMDQ9H2S6 317 aa7.08□□□□□ -1.28
CSTF3-201ENST00000323959 CRISPLD1Q9H336 500 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms