RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MECRQ9BV79 373 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 WWP1Q9H0M0 922 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.03□□□□□ -0.965e-6■□□□□ 10.5
CLK1-201ENST00000321356 ARMCX1Q9P291 453 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 PLA2G4CQ9UP65 541 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 KAT6AQ92794 2004 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 PAPPA2Q9BXP8 1791 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 PLXNA1Q9UIW2 1896 aa9.03□□□□□ -0.96
CLK1-201ENST00000321356 MDM4O15151 490 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 UGT1A9O60656 530 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 GCATO75600 419 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 NPTXRO95502 500 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 ZBED1O96006 694 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 BPGMP07738 259 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 APRTP07741 180 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TPSB2P20231 275 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 CRHR1P34998 444 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 PGM1P36871 562 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 SLC26A2P50443 739 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 SERPINB9P50453 376 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 CLCN3P51790 818 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 NDST1P52848 882 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 IRX1P78414 480 aaPredicted RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 TMPRSS15P98073 1019 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 POU5F1BQ06416 359 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 AP1B1Q10567 949 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 KRT81Q14533 505 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TPSAB1Q15661 275 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TBCCQ15814 346 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 CCDC6Q16204 474 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 DBN1Q16643 649 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 PKDCCQ504Y2 493 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TREML2Q5T2D2 321 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 OR6B2Q6IFH4 312 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 OLFML1Q6UWY5 402 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TIFABQ6ZNK6 161 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 LRRC74BQ6ZQY2 392 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 CYS1Q717R9 158 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 IFNLR1Q8IU57 520 aaPredicted RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 TTC39CQ8N584 583 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.02□□□□□ -0.96
CLK1-201ENST00000321356 GSDMBQ8TAX9 411 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 AFG1LQ8WV93 481 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TRAPPC12Q8WVT3 735 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 SCG3Q8WXD2 468 aaKnown RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.965e-8■■■□□ 15.6
CLK1-201ENST00000321356 HPDLQ96IR7 371 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 ZNF668Q96K58 619 aaPredicted RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 FGD4Q96M96 766 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 HEXIM2Q96MH2 286 aaKnown RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 SPATC1LQ9H0A9 340 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 UGT1A7Q9HAW7 530 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 UGT1A10Q9HAW8 530 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 UGT1A8Q9HAW9 530 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 PRMT7Q9NVM4 692 aaPredicted RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 ZNF212Q9UDV6 495 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 TSPAN16Q9UKR8 245 aa9.02□□□□□ -0.96
CLK1-201ENST00000321356 HBS1LQ9Y450 684 aaKnown RBP9.02□□□□□ -0.96
CLK1-201ENST00000321356 B2RBV5 119 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 FZD9O00144 591 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CYB561D2O14569 222 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 C22orf31O95567 290 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CHRM1P11229 460 aaPredicted RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 SKIP12755 728 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 TUBP50607 506 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 SESN3P58005 492 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 TNFAIP2Q03169 654 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 BMPR2Q13873 1038 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 STILQ15468 1287 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CHI3L2Q15782 390 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CA9Q16790 459 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CDO1Q16878 200 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 TMEM132AQ24JP5 1023 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 SLC10A6Q3KNW5 377 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 DALRD3Q5D0E6 543 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 FAM182AQ5T1J6 154 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 STXBP5Q5T5C0 1151 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 FAXCQ5TGI0 409 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 EFCAB12Q6NXP0 572 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 TRMT10BQ6PF06 316 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 EEPD1Q7L9B9 569 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 ARCQ7LC44 396 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 NET1Q7Z628 596 aaPredicted RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 NUDCD3Q8IVD9 361 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 ARID3BQ8IVW6 561 aaPredicted RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 PDCD7Q8N8D1 485 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 RBM15BQ8NDT2 890 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 SMC1BQ8NDV3 1235 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 CCDC110Q8TBZ0 833 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 STMN2Q93045 179 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 ACAP3Q96P50 834 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 EBNA1BP2Q99848 306 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 SYT15Q9BQS2 421 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 SNRNP25Q9BV90 132 aaKnown RBP9.02□□□□□ -0.97
CLK1-201ENST00000321356 CCDC106Q9BWC9 280 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 SLC4A5Q9BY07 1137 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 PDZD7Q9H5P4 517 aa9.02□□□□□ -0.97
CLK1-201ENST00000321356 SLC24A3Q9HC58 644 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms