RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 P4HA2O15460 535 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 ZNF806P0C7X5 589 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 CD44P16070 742 aaKnown RBP18.65■□□□□ 0.58
TPM1-203ENST00000317516 GBP1P32455 592 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 CHKAP35790 457 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 TKTL1P51854 596 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 BCAT1P54687 386 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 LRMPQ12912 555 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 RAB41Q5JT25 222 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 EMC10Q5UCC4 262 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 GRAMD4Q6IC98 578 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 TPGS1Q6ZTW0 290 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 PHTF2Q8N3S3 785 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 TERB1Q8NA31 727 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 DNAJC17Q9NVM6 304 aaKnown RBP18.65■□□□□ 0.58
TPM1-203ENST00000317516 MARK1Q9P0L2 795 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 TSPAN16Q9UKR8 245 aa18.65■□□□□ 0.58
TPM1-203ENST00000317516 PPP1R3GB7ZBB8 358 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 SGK1O00141 431 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 XPO1O14980 1071 aaKnown RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 MDM4O15151 490 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 ZBTB24O43167 697 aaPredicted RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 CACNG3O60359 315 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 STC2O76061 302 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 FGFR1OPO95684 399 aaKnown RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 ZBED1O96006 694 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 TYRP14679 529 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
TPM1-203ENST00000317516 MESP2Q0VG99 397 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 BST2Q10589 180 aaKnown RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 BYSLQ13895 437 aaKnown RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 MORC3Q14149 939 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 AASDHQ4L235 1098 aaPredicted RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 C10orf76Q5T2E6 689 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 PM20D1Q6GTS8 502 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 SDE2Q6IQ49 451 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 TTI2Q6NXR4 508 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 ZNF513Q8N8E2 541 aaPredicted RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 IPO9Q96P70 1041 aaKnown RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 DUSP15Q9H1R2 295 aaPredicted RBP18.64■□□□□ 0.57
TPM1-203ENST00000317516 RASAL2Q9UJF2 1139 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 STARD13Q9Y3M8 1113 aa18.64■□□□□ 0.57
TPM1-203ENST00000317516 BIN1O00499 593 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 SLC30A4O14863 429 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 DCLK1O15075 740 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 PAEPP09466 180 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 PDE4CQ08493 712 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 EFEMP1Q12805 493 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 TMEM92Q6UXU6 159 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 Q6ZNB5 142 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 SFTPA1Q8IWL2 248 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 MDGA1Q8NFP4 955 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 TPSD1Q9BZJ3 242 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 VPS45Q9NRW7 570 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 OLA1Q9NTK5 396 aaKnown RBP18.63■□□□□ 0.57
TPM1-203ENST00000317516 MARCH2Q9P0N8 246 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 BCCIPQ9P287 314 aaKnown RBP eCLIP18.63■□□□□ 0.57
TPM1-203ENST00000317516 PCDHB4Q9Y5E5 795 aa18.63■□□□□ 0.57
TPM1-203ENST00000317516 ANTXRLA6NF34 631 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
TPM1-203ENST00000317516 SETSIPP0DME0 302 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 BMP6P22004 513 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 MPLP40238 635 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 DGKGP49619 791 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 PAK1Q13153 545 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 STILQ15468 1287 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 TMEM270Q6UE05 265 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 SIX6OS1Q8N1H7 587 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 PGBD3Q8N328 593 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 PPM1KQ8N3J5 372 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 RNF139Q8WU17 664 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 SPACA7Q96KW9 195 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 ULBP1Q9BZM6 244 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 CTNND2Q9UQB3 1225 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 INVSQ9Y283 1065 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 HELZP42694 1942 aaKnown RBP18.62■□□□□ 0.57
TPM1-203ENST00000317516 ATG2BQ96BY7 2078 aa18.62■□□□□ 0.57
TPM1-203ENST00000317516 O00370 1275 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 CYBBP04839 570 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 HMBSP08397 361 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 NTSR1P30989 418 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 CREB5Q02930 508 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 CNGA2Q16280 664 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 PLA2G2CQ5R387 149 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 LCLAT1Q6UWP7 414 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 UBA3Q8TBC4 463 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 KCTD13Q8WZ19 329 aa18.61■□□□□ 0.57
TPM1-203ENST00000317516 DDX1Q92499 740 aaKnown RBP18.61■□□□□ 0.57
TPM1-203ENST00000317516 SRRTQ9BXP5 876 aaKnown RBP18.61■□□□□ 0.57
TPM1-203ENST00000317516 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.61■□□□□ 0.57
TPM1-203ENST00000317516 CACNA1AO00555 2505 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 TCRBV21S2A2A0A5A6 115 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 SLC12A8A0AV02 714 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 DCDC2BA2VCK2 349 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 MAP3K13O43283 966 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 ADAM23O75077 832 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 CAVIN2O95810 425 aa18.6■□□□□ 0.57
TPM1-203ENST00000317516 KLKB1P03952 638 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms