RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PORCNQ9H237 461 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 GP5P40197 560 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 FAAP100Q0VG06 881 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 DUPD1Q68J44 220 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 YTHDF3Q7Z739 585 aaKnown RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 ZDHHC17Q8IUH5 632 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 TAGAPQ8N103 731 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 HTR3CQ8WXA8 447 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 FAM162AQ96A26 154 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 BTBD10Q9BSF8 475 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 C17orf80Q9BSJ5 609 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 MYLK2Q9H1R3 596 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 UBP1Q9NZI7 540 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 MARSP56192 900 aaKnown RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 FMO1Q01740 532 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 CNGA2Q16280 664 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SYTL3Q4VX76 610 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SGO1Q5FBB7 561 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 HYIQ5T013 277 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 VSIG10LQ86VR7 867 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 TDRD5Q8NAT2 981 aaKnown RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 OXNAD1Q96HP4 312 aaPredicted RBP14.19□□□□□ -0.14
SPAST-201ENST00000315285 FICDQ9BVA6 458 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 ZFYVE28Q9HCC9 887 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 SOX13Q9UN79 622 aa14.19□□□□□ -0.14
SPAST-201ENST00000315285 MYO5BQ9ULV0 1848 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 LACTBL1A8MY62 500 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 TGFB1I1O43294 461 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 SERPINE1P05121 402 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 SLURP2P0DP57 97 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 LHX1P48742 406 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 DAB2P98082 770 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 ITGA9Q13797 1035 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 IZUMO2Q6UXV1 221 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 SCUBE3Q8IX30 993 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 CKAP2Q8WWK9 683 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 JADE3Q92613 823 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 LRRC19Q9H756 370 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 TRMT6Q9UJA5 497 aaKnown RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 KCNH4Q9UQ05 1017 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 DRG1Q9Y295 367 aaKnown RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 ZNF711Q9Y462 761 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PPP2R3BQ9Y5P8 575 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 MYO1GB0I1T2 1018 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PRRG1O14668 218 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PRPF4O43172 522 aaKnown RBP eCLIP14.18□□□□□ -0.14
SPAST-201ENST00000315285 SNX3O60493 162 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 CBX6O95503 412 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PSMA4P25789 261 aaKnown RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 KRT72Q14CN4 511 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 FKBP9O95302 570 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 HMGCRP04035 888 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 THP07101 528 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 THPOP40225 353 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 DPYSL3Q14195 570 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 MTFR1Q15390 333 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PAN2Q504Q3 1202 aaKnown RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 ARSHQ5FYA8 562 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 TDRD10Q5VZ19 366 aaKnown RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 FKBP9P1Q75LS8 142 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 PLEKHH3Q7Z736 793 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 C10orf88Q9H8K7 445 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 THAP1Q9NVV9 213 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 UBIAD1Q9Y5Z9 338 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 GPR182O15218 404 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 NUDT17P0C025 328 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 AMPD1P23109 780 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 KDELR1P24390 212 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 GTF2A2P52657 109 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 TTC33Q6PID6 262 aaPredicted RBP14.18□□□□□ -0.14
SPAST-201ENST00000315285 RBBP8Q99708 897 aa14.18□□□□□ -0.14
SPAST-201ENST00000315285 ROBO3Q96MS0 1386 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 ZSCAN9O15535 394 aaPredicted RBP14.17□□□□□ -0.14
SPAST-201ENST00000315285 RBP1P09455 135 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 SLC1A6P48664 564 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 NR2C2P49116 596 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 DEFB107AQ8IZN7 70 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 LZICQ8WZA0 190 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 FOPNLQ96NB1 174 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 ANKRD27Q96NW4 1050 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 TRIM45Q9H8W5 580 aaPredicted RBP14.17□□□□□ -0.14
SPAST-201ENST00000315285 TCF7L2Q9NQB0 619 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 SETD4Q9NVD3 440 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 C2orf81A6NN90 581 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 E5RJQ4 531 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 TOMM70O94826 608 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 ALADP13716 330 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 KCNA4P22459 653 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 YWHAZP63104 245 aaKnown RBP14.17□□□□□ -0.14
SPAST-201ENST00000315285 ADIGQ0VDE8 80 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 CSHL1Q14406 222 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 SNX31Q8N9S9 440 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 ECSITQ9BQ95 431 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 DYRK4Q9NR20 520 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 RNF112Q9ULX5 631 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
SPAST-201ENST00000315285 RBAK-RBAKDNI3L0D1 243 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms