RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 DGKKQ5KSL6 1271 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 N4BP2L1Q5TBK1 243 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 CBWD2Q8IUF1 395 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 AENQ8WTP8 325 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MCRS1Q96EZ8 462 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 PGM2Q96G03 612 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 UBXN8O00124 270 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 CPSF4O95639 269 aaKnown RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 KRT6BP04259 564 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 VDRP11473 427 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ALOX12P18054 663 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 KRT6CP48668 564 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 NFIL3Q16649 462 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 TIGD7Q6NT04 549 aaPredicted RBP14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ATP6V0D2Q8N8Y2 350 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 APOPT1Q96IL0 206 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 NRDE2Q9H7Z3 1164 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 RABGEF1Q9UJ41 708 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 SLC37A4O43826 429 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 CBX6O95503 412 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MPOP05164 745 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 TPBGLP0DKB5 382 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 CASP4P49662 377 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 XRRA1Q6P2D8 792 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 LRRC71Q8N4P6 559 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ACTL9Q8TC94 416 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 FAM172AQ8WUF8 416 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 MTMR8Q96EF0 704 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 NMRK2Q9NPI5 230 aa14.07□□□□□ -0.16
CLCN6-201ENST00000312413 ZSCAN5CA6NGD5 496 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 MEI4A8MW99 385 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 STK25O00506 426 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SASH3O75995 380 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 GH1P01241 217 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SHROOM1Q2M3G4 852 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 MGAT5BQ3V5L5 792 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CCDC153Q494R4 210 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 EFCAB12Q6NXP0 572 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 DHRSXQ8N5I4 330 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 C10orf53Q8N6V4 93 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SRPK1Q96SB4 655 aaKnown RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 APOL4Q9BPW4 351 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 MGAT4DA6NG13 374 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CES2O00748 559 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 IRF1P10914 325 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 ERVK-9P63128 1117 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 C10orf120Q5SQS8 335 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 B3GNT6Q6ZMB0 384 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 NEK10Q6ZWH5 1172 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 ZKSCAN4Q969J2 545 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SLITRK1Q96PX8 696 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 C9orf16Q9BUW7 83 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 PIF1Q9H611 641 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 ETAA1Q9NY74 926 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 USP18Q9UMW8 372 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 DUSP12Q9UNI6 340 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 KLHL20Q9Y2M5 609 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 PDE9AO76083 593 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 F9P00740 461 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CAPN1P07384 714 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 MAGEA10P43363 369 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 IFI35P80217 286 aaPredicted RBP14.06□□□□□ -0.16
CLCN6-201ENST00000312413 TRAF3Q13114 568 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 FOXR1Q6PIV2 292 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SLFN11Q7Z7L1 901 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 WDR48Q8TAF3 677 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CAMKK2Q96RR4 588 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 MSH4O15457 936 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 AP5Z1O43299 807 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 ARL4DP49703 201 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 TROAPQ12815 778 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 NR6A1Q15406 480 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CNGA2Q16280 664 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 ERAP2Q6P179 960 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 GPATCH2LQ9NWQ4 482 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 NDUFAF1Q9Y375 327 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 HBP1O60381 514 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 FAM153BP0C7A2 387 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CDK16Q00536 496 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 FAM153CQ494X1 144 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 CYP4Z2PQ8N1L4 340 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 POU5F2Q8N7G0 328 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 FIG4Q92562 907 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 RNPEPL1Q9HAU8 725 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 SH3BP1Q9Y3L3 701 aa14.06□□□□□ -0.16
CLCN6-201ENST00000312413 KDM6AO15550 1401 aaPredicted RBP14.05□□□□□ -0.16
CLCN6-201ENST00000312413 FAM220BPB1ANY3 271 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 PSMG1O95456 288 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 MT-CO1P00395 513 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 FLT3P36888 993 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 SKIV2L2P42285 1042 aaKnown RBP14.05□□□□□ -0.16
CLCN6-201ENST00000312413 PRKAA2P54646 552 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 KLHL17Q6TDP4 642 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 STK32CQ86UX6 486 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 B3GALNT2Q8NCR0 500 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 APOL2Q9BQE5 337 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 DCLK3Q9C098 648 aa14.05□□□□□ -0.16
CLCN6-201ENST00000312413 A2ML1A8K2U0 1454 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms