RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ZNF541Q9H0D2 1346 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 ADCY6O43306 1168 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 TBC1D12O60347 775 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 CYP3A4P08684 503 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 WEE2P0C1S8 567 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 NRLP54845 237 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 MRPS5P82675 430 aaKnown RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 BMPR2Q13873 1038 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 SNRNP35Q16560 246 aaKnown RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 TEX44Q53QW1 395 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 PACS1Q6VY07 963 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 ERI1Q8IV48 349 aaKnown RBP18.68■□□□□ 0.58
SPSB4-201ENST00000310546 FBXW8Q8N3Y1 598 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 NAT8LQ8N9F0 302 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 FBXL13Q8NEE6 735 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 GSDMBQ8TAX9 411 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 PPP4R1Q8TF05 950 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 SELENONQ9NZV5 590 aa18.68■□□□□ 0.58
SPSB4-201ENST00000310546 SIN3BO75182 1162 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ITGAVP06756 1048 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 THRAP10827 490 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 NCF2P19878 526 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 HALP42357 657 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 STX3Q13277 289 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 MYBPC2Q14324 1141 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 POTEHQ6S545 545 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 SPOCD1Q6ZMY3 1216 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 MON1BQ7L1V2 547 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 LPCAT2Q7L5N7 544 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 WDR75Q8IWA0 830 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 CCDC33Q8N5R6 958 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 SYT17Q9BSW7 474 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 MRPL47Q9HD33 250 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 SPATA7Q9P0W8 599 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 HEY1Q9Y5J3 304 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ITM2AO43736 263 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 FOXD2O60548 495 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 LYPLA1O75608 230 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 TOP3BO95985 862 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 CROCCP3Q8IVE0 287 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 RSAD2Q8WXG1 361 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ACCSQ96QU6 501 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 CCT7Q99832 543 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 TRIM56Q9BRZ2 755 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 STRA6Q9BX79 667 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 XAB2Q9HCS7 855 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 RAB26Q9ULW5 256 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 AVILO75366 819 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 NELFEP18615 380 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 MSX2P35548 267 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ATXN3P54252 364 aaPredicted RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 MRPS22P82650 360 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 TMEM53Q6P2H8 277 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ALDH16A1Q8IZ83 802 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 CFAP36Q96G28 342 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 SIRPGQ9P1W8 387 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 HERC5Q9UII4 1024 aaKnown RBP18.67■□□□□ 0.58
SPSB4-201ENST00000310546 HACL1Q9UJ83 578 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 ZBTB21Q9ULJ3 1066 aa18.67■□□□□ 0.58
SPSB4-201ENST00000310546 KANSL1LA0AUZ9 987 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 GAS7O60861 476 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 STAMBPO95630 424 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 RELAQ04206 551 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 APOFQ13790 326 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 ITPRIPL1Q6GPH6 555 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 FRMD7Q6ZUT3 714 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 DQX1Q8TE96 717 aaKnown RBP18.66■□□□□ 0.58
SPSB4-201ENST00000310546 PLGRKTQ9HBL7 147 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 PSMD13Q9UNM6 376 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 CLEC11AQ9Y240 323 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 F8VP50 259 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 CFBP00751 764 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 IDO1P14902 403 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 ITGAXP20702 1163 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 RPL22P35268 128 aaKnown RBP18.66■□□□□ 0.58
SPSB4-201ENST00000310546 TFDP3Q5H9I0 405 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 BORAQ6PGQ7 559 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 ACTL9Q8TC94 416 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 DCAF4Q8WV16 495 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 COPS7BQ9H9Q2 264 aaPredicted RBP18.66■□□□□ 0.58
SPSB4-201ENST00000310546 PKD2L1Q9P0L9 805 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 EFR3BQ9Y2G0 817 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 DNAJC16Q9Y2G8 782 aa18.66■□□□□ 0.58
SPSB4-201ENST00000310546 HTR3EA5X5Y0 456 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 FBP2O00757 339 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 XPOTO43592 962 aaKnown RBP18.65■□□□□ 0.58
SPSB4-201ENST00000310546 KLHL2O95198 593 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 GPC3P51654 580 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 CDKL1Q00532 357 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 WASHC5Q12768 1159 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 TTC39BQ5VTQ0 682 aaPredicted RBP18.65■□□□□ 0.58
SPSB4-201ENST00000310546 PADI6Q6TGC4 694 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 NKD2Q969F2 451 aaPredicted RBP18.65■□□□□ 0.58
SPSB4-201ENST00000310546 LXNQ9BS40 222 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 WDR18Q9BV38 432 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 AMNQ9BXJ7 453 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 DEFB129Q9H1M3 183 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 C6orf203Q9P0P8 240 aaPredicted RBP18.65■□□□□ 0.58
SPSB4-201ENST00000310546 AGTPBP1Q9UPW5 1226 aa18.65■□□□□ 0.58
SPSB4-201ENST00000310546 PCDHB2Q9Y5E7 798 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms