RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CDH8P55286 799 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 WASHC5Q12768 1159 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 N4BP2L1Q5TBK1 243 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CDR2LQ86X02 465 aaPredicted RBP11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CMTM5Q96DZ9 223 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 C20orf27Q9GZN8 174 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 DNAJB4Q9UDY4 337 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 SLC4A7Q9Y6M7 1214 aa11.54□□□□□ -0.56
PTPN7-201ENST00000309017 CHADO15335 359 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 DCXO43602 365 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CLPTM1O96005 669 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PDGFRAP16234 1089 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 VWA5B1Q5TIE3 1220 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PDPK2PQ6A1A2 396 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 IYDQ6PHW0 289 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 KIAA0319LQ8IZA0 1049 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 WDTC1Q8N5D0 677 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 TTLL6Q8N841 843 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 RDM1Q8NG50 284 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CNBD2Q96M20 576 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CPXM1Q96SM3 734 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CCDC28BQ9BUN5 200 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 HAPLN2Q9GZV7 340 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PIH1D1Q9NWS0 290 aaKnown RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 SIRPGQ9P1W8 387 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 APPL1Q9UKG1 709 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ADAMTS6Q9UKP5 1117 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 GREB1LQ9C091 1923 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 C15orf38-AP3S2A0A0A6YYH1 394 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 C3orf70A6NLC5 250 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 H0YIN7 160 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 AIM2O14862 343 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ITM2AO43736 263 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 RFPL1O75677 317 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 FOLH1Q04609 750 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 TMED1Q13445 227 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PRKG1Q13976 671 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ARPINQ7Z6K5 226 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 NLGN1Q8N2Q7 840 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 NIPA2Q8N8Q9 360 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 UBA3Q8TBC4 463 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF526Q8TF50 670 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 JADE3Q92613 823 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ATXN7L3BQ96GX2 97 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 GALNT8Q9NY28 637 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ZBTB12Q9Y330 459 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 E9PBE3 544 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 KLHL41O60662 606 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PMLP29590 882 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 C15orf59Q2T9L4 293 aaPredicted RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ZNF667Q5HYK9 610 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 KYAT3Q6YP21 454 aaKnown RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 UNC5AQ6ZN44 842 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 RBM44Q6ZP01 1051 aaKnown RBP11.53□□□□□ -0.56
PTPN7-201ENST00000309017 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CDKL2Q92772 493 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 PNPOQ9NVS9 261 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 CDH22Q9UJ99 828 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 INPP5FQ9Y2H2 1132 aa11.53□□□□□ -0.56
PTPN7-201ENST00000309017 SPDYE2BA6NHP3 402 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 APOL1O14791 398 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 SIN3BO75182 1162 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 SPDYE6P0CI01 402 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 DESP17661 470 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 USP46P62068 366 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 KCNJ11Q14654 390 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 NOMO1Q15155 1222 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 HSF5Q4G112 596 aaPredicted RBP11.52□□□□□ -0.56
PTPN7-201ENST00000309017 ANKRD20A4Q4UJ75 823 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 SH3PXD2AQ5TCZ1 1133 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 FAM91A1Q658Y4 838 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 GALNT4Q8N4A0 578 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 GSDMBQ8TAX9 411 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 ANKRD36BP1Q96IX9 119 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 HEXIM2Q96MH2 286 aaKnown RBP11.52□□□□□ -0.56
PTPN7-201ENST00000309017 GRIP2Q9C0E4 1043 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 MAN1C1Q9NR34 630 aa11.52□□□□□ -0.56
PTPN7-201ENST00000309017 KLRG2A4D1S0 409 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-201ENST00000309017 WDR46O15213 610 aaKnown RBP11.52□□□□□ -0.57
PTPN7-201ENST00000309017 HSPA4LO95757 839 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 TRUB2O95900 331 aaKnown RBP11.52□□□□□ -0.57
PTPN7-201ENST00000309017 HMGCRP04035 888 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 FAM200BP0CF97 657 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 NAMPTP43490 491 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SERPINB9P50453 376 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SESN2P58004 480 aaPredicted RBP11.52□□□□□ -0.57
PTPN7-201ENST00000309017 HSP90AA5PQ58FG0 334 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 FAM47CQ5HY64 1035 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 LCA5Q86VQ0 697 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 PREBQ9HCU5 417 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 ZNF302Q9NR11 478 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SMYD2Q9NRG4 433 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 POMPQ9Y244 141 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 SMIM31A0A1B0GVY4 71 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 ERBB2P04626 1255 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 TYK2P29597 1187 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 TGFB2P61812 414 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 CLDN10P78369 228 aa11.52□□□□□ -0.57
PTPN7-201ENST00000309017 CRADDP78560 199 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms