RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 C1orf186Q6ZWK4 172 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 CDK5RAP1Q96SZ6 601 aaKnown RBP16.42■□□□□ 0.22
USP42-201ENST00000306177 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 EMILIN2Q9BXX0 1053 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 GIMAP4Q9NUV9 329 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 VANGL2Q9ULK5 521 aa16.42■□□□□ 0.22
USP42-201ENST00000306177 TOMM70O94826 608 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 ITGALP20701 1170 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 GRK2P25098 689 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 ARL4DP49703 201 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 ERVK-9P63128 1117 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 ADIGQ0VDE8 80 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 HORMAD1Q86X24 394 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 HERC6Q8IVU3 1022 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 HAS1Q92839 578 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 ECSITQ9BQ95 431 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 NT5MQ9NPB1 228 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 TLR8Q9NR97 1041 aaKnown RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 LRRC10BA6NIK2 292 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 DNALI1O14645 258 aaPredicted RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 PYGMP11217 842 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 GLRBP48167 497 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 YWHAZP63104 245 aaKnown RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 CBWD6Q4V339 395 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 CBWD3Q5JTY5 395 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 CBWD5Q5RIA9 395 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 TLK2Q86UE8 772 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 NT5DC3Q86UY8 548 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 SYTL2Q9HCH5 934 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 NMRK2Q9NPI5 230 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 RIPK2O43353 540 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 EIF4BP23588 611 aaKnown RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 RHOAP61586 193 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 MYO1HQ8N1T3 1032 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 STX19Q8N4C7 294 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 MANSC4A6NHS7 340 aaPredicted RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 AKR1A1P14550 325 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 EPHB3P54753 998 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 SEL1L3Q68CR1 1132 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 CNDP1Q96KN2 507 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 CLPBQ9H078 707 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 FBXO44Q9H4M3 255 aa16.41■□□□□ 0.22
USP42-201ENST00000306177 TIMM13Q9Y5L4 95 aaPredicted RBP16.41■□□□□ 0.22
USP42-201ENST00000306177 C3P01024 1663 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ANKRD63C9JTQ0 380 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SLCO1B7G3V0H7 640 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 PSMD10O75832 226 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 POMCP01189 267 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SOAT1P35610 550 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 VSIG10LQ86VR7 867 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 DDI1Q8WTU0 396 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 UCMAQ8WVF2 138 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SMARCD1Q96GM5 515 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ADGRE3Q9BY15 652 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 PCDHB5Q9Y5E4 795 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ATRNO75882 1429 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 GLP2RO95838 553 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 EVX2Q03828 476 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 PORCNQ9H237 461 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 EFCAB1Q9HAE3 211 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 NMRK1Q9NWW6 199 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 DNAJC16Q9Y2G8 782 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SLURP2P0DP57 97 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
USP42-201ENST00000306177 VHLP40337 213 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ZBTB45Q96K62 511 aaPredicted RBP16.4■□□□□ 0.22
USP42-201ENST00000306177 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 GPAMQ9HCL2 828 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 RBM22Q9NW64 420 aaKnown RBP eCLIP16.4■□□□□ 0.22
USP42-201ENST00000306177 SPASTQ9UBP0 616 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 NAALADL1Q9UQQ1 740 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 TTLL13PA6NNM8 815 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 GOLGA8TH3BQL2 631 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 CPA3P15088 417 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 UBA1P22314 1058 aaKnown RBP16.4■□□□□ 0.22
USP42-201ENST00000306177 ACAP1Q15027 740 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 WLSQ5T9L3 541 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 CATSPERGQ6ZRH7 1159 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 CCDC60Q8IWA6 550 aaPredicted RBP16.4■□□□□ 0.22
USP42-201ENST00000306177 EDEM1Q92611 657 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 ELMO3Q96BJ8 720 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 THAP11Q96EK4 314 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 SOX13Q9UN79 622 aa16.4■□□□□ 0.22
USP42-201ENST00000306177 CYP3A7-CYP3A51PA0A087WV96 503 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 CYP3A7P24462 503 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 SERPINB5P36952 375 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 NR2C2P49116 596 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 AQP5P55064 265 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MTA1Q13330 715 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 ENTPD7Q9NQZ7 604 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 NCKIPSDQ9NZQ3 722 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 SIK3Q9Y2K2 1263 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MAN1A2O60476 641 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 CDH17Q12864 832 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 MARC1Q5VT66 337 aa16.39■□□□□ 0.21
USP42-201ENST00000306177 HOMEZQ8IX15 550 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms