RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 EPB41L1Q9H4G0 881 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PFDN2Q9UHV9 154 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 SPEF1Q9Y4P9 236 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 KATNA1O75449 491 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CBX5P45973 191 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 PERM1Q5SV97 790 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 HLA-DQA1Q5Y7H0 255 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 SETD9Q8NE22 299 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 OR6Y1Q8NGX8 325 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 EIF2AK1Q9BQI3 630 aaKnown RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TM9SF1O15321 606 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 KRT36O76013 467 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 RLN1P04808 185 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CHRNGP07510 517 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 S100A2P29034 98 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 SFNP31947 248 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 TXNRD1Q16881 649 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 FAM117BQ6P1L5 589 aa13.76□□□□□ -0.21
TRIM56-201ENST00000306085 ZNF483Q8TF39 744 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-201ENST00000306085 CHL1O00533 1208 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 NCOA4Q13772 614 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 MYO1HQ8N1T3 1032 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CCDC28BQ9BUN5 200 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TRMT13Q9NUP7 481 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SERPINA3P01011 423 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 BAG6P46379 1132 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 RBM43Q6ZSC3 357 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 PROX1Q92786 737 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ACOX2Q99424 681 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 WDR41Q9HAD4 459 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 MGAT5BQ3V5L5 792 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 EIF3MQ7L2H7 374 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TCAIMQ8N3R3 496 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SPACA7Q96KW9 195 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 OXCT2Q9BYC2 517 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 FEM1BQ9UK73 627 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 AGAP1Q9UPQ3 857 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TEX33O43247 280 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ZNF806P0C7X5 589 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 IFNAR1P17181 557 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CCNA2P20248 432 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SLC29A2Q14542 456 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ISLR2Q6UXK2 745 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 FRMD5Q7Z6J6 570 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 FAM9CQ8IZT9 166 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 MKNK1Q9BUB5 465 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 APEX2Q9UBZ4 518 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 R3HDM2Q9Y2K5 976 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CCDC154A6NI56 674 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 FCER1AP12319 257 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 HALP42357 657 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 Q4G0T1 1027 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 EFHC1Q5JVL4 640 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CROCCP3Q8IVE0 287 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ZNF615Q8N8J6 731 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SEMA6AQ9H2E6 1030 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 LIMD1Q9UGP4 676 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TCF4P15884 667 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 PLA2G4FQ68DD2 849 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SSH3Q8TE77 659 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 NAGPAQ9UK23 515 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ZMYM3Q14202 1370 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TSPOAP1O95153 1857 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CLOCKO15516 846 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 P4HBP07237 508 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 RAG1P15918 1043 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 OMPP47874 163 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 IL2P60568 153 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 C1orf189Q5VU69 101 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 MARK2Q7KZI7 788 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 JAMLQ86YT9 394 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 RNF145Q96MT1 663 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 TMEM120AQ9BXJ8 343 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 MARK1Q9P0L2 795 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 VTI1BQ9UEU0 232 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ACAP1Q15027 740 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 PDPK2PQ6A1A2 396 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 DNAJC14Q6Y2X3 702 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 SCAIQ8N9R8 606 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 CNPY3Q9BT09 278 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 ARHGEF10O15013 1369 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 PRKAR1AP10644 381 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 NAPEPLDQ6IQ20 393 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 EPS8L3Q8TE67 593 aaKnown RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 VCPKMTQ9H867 229 aa13.75□□□□□ -0.21
TRIM56-201ENST00000306085 JPH1Q9HDC5 661 aaPredicted RBP13.75□□□□□ -0.21
TRIM56-201ENST00000306085 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
TRIM56-201ENST00000306085 TBX3O15119 743 aa13.74□□□□□ -0.21
TRIM56-201ENST00000306085 STXBP1P61764 594 aaKnown RBP13.74□□□□□ -0.21
TRIM56-201ENST00000306085 C5orf22Q49AR2 442 aa13.74□□□□□ -0.21
TRIM56-201ENST00000306085 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
TRIM56-201ENST00000306085 RSAD1Q9HA92 442 aa13.74□□□□□ -0.21
TRIM56-201ENST00000306085 MLXQ9UH92 298 aa13.74□□□□□ -0.21
TRIM56-201ENST00000306085 GPC6Q9Y625 555 aaPredicted RBP13.74□□□□□ -0.21
TRIM56-201ENST00000306085 CCDC189A1A4V9 331 aa13.74□□□□□ -0.21
TRIM56-201ENST00000306085 SFSWAPQ12872 951 aaKnown RBP13.74□□□□□ -0.21
TRIM56-201ENST00000306085 GRB14Q14449 540 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms