RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 SLC25A23Q9BV35 468 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 TMEM120AQ9BXJ8 343 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 NAGPAQ9UK23 515 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ZNF335Q9H4Z2 1342 aaPredicted RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 RAP1GAPP47736 663 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 OTUD4Q01804 1114 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 CCNG2Q16589 344 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 HHIPL2Q6UWX4 724 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 OTOAQ7RTW8 1153 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 YAF2Q8IY57 180 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 TBCBQ99426 244 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ING4Q9UNL4 249 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CROCCQ5TZA2 2017 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 RRN3P2A6NIE6 340 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 TAF4O00268 1085 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
GCN1-201ENST00000300648 ATP6V0D2Q8N8Y2 350 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 PIGBQ92521 554 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 NMD3Q96D46 503 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 UBE2QL1A1L167 161 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CCDC162PA2VCL2 907 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CYP2D6P10635 497 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 PSMD4P55036 377 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 SPIRE1Q08AE8 756 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 VPS72Q15906 364 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ZDHHC13Q8IUH4 622 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CPA5Q8WXQ8 436 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ACOT9Q9Y305 439 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CLRN2A0PK11 232 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 IRGMA1A4Y4 181 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CCDC182A6NF36 153 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 IL12AP29459 219 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 PTENP60484 403 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ROR2Q01974 943 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 PDPK2PQ6A1A2 396 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 TMEM132CQ8N3T6 1108 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 APOPT1Q96IL0 206 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 NSMCE2Q96MF7 247 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 CNPP09543 421 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 ACAT1P24752 427 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 RPA1P27694 616 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 RCVRNP35243 200 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 HPCAL1P37235 193 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 SKIV2L2P42285 1042 aaKnown RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 SEC24CP53992 1094 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 RABL6Q3YEC7 729 aaPredicted RBP11.61□□□□□ -0.55
GCN1-201ENST00000300648 BICRALQ6AI39 1079 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 NOTUMQ6P988 496 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 PIDD1Q9HB75 910 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 TBC1D13Q9NVG8 400 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 ING3Q9NXR8 418 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 VPS51Q9UID3 782 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 MINPP1Q9UNW1 487 aa11.61□□□□□ -0.55
GCN1-201ENST00000300648 H3BNX3 289 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 CYP19A1P11511 503 aaPredicted RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 ACLYP53396 1101 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 NR1H2P55055 460 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 RAB15P59190 212 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 ALDH6A1Q02252 535 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 ZDHHC17Q8IUH5 632 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 FAM71DQ8N9W8 422 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 MDM1Q8TC05 714 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 GDPD5Q8WTR4 605 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 L1RE1Q9UN81 338 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 SQORQ9Y6N5 450 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 ZBTB39O15060 712 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 ALADP13716 330 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 FXR1P51114 621 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■□□□□ 10.5
GCN1-201ENST00000300648 NET1Q7Z628 596 aaPredicted RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 ADCK2Q7Z695 626 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 CASKIN2Q8WXE0 1202 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 CENPIQ92674 756 aaPredicted RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 DDX17Q92841 729 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 PAFAH2Q99487 392 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 IL1RL2Q9HB29 575 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 CCNB1IP1Q9NPC3 277 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.6□□□□□ -0.553e-6■□□□□ 10.9
GCN1-201ENST00000300648 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 SPATA31A6Q5VVP1 1343 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 SYNDIG1LA6NDD5 238 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 EIF4E1BA6NMX2 242 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 GMFBP60983 142 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 GRTP1Q5TC63 336 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 MTDHQ86UE4 582 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 NOA1Q8NC60 698 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 OXER1Q8TDS5 423 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 ASZ1Q8WWH4 475 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 CLPBQ9H078 707 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 RPS7P62081 194 aaKnown RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 RFX4Q33E94 735 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 TBCELQ5QJ74 424 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 KCNQ3O43525 872 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 MOCS2O96007 188 aaPredicted RBP11.6□□□□□ -0.55
GCN1-201ENST00000300648 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 DMPKQ09013 629 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 IPMKQ8NFU5 416 aa11.6□□□□□ -0.55
GCN1-201ENST00000300648 MYDGFQ969H8 173 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms