RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 ETFBKMTQ8IXQ9 262 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 ZMIZ2Q8NF64 920 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 OR2I1PQ8NGU4 316 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 CCDC26Q8TAB7 109 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
CNOT9-202ENST00000295701 CEP295NLQ96MC4 621 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 SLITRK1Q96PX8 696 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 ACOX2Q99424 681 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 MED10Q9BTT4 135 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 SDCBP2Q9H190 292 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 BLZF1Q9H2G9 400 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 TNMDQ9H2S6 317 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 UPF2Q9HAU5 1272 aaKnown RBP9.85□□□□□ -0.83
CNOT9-202ENST00000295701 KIAA1586Q9HCI6 787 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 CD93Q9NPY3 652 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 GMIPQ9P107 970 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 BCCIPQ9P287 314 aaKnown RBP eCLIP9.85□□□□□ -0.83
CNOT9-202ENST00000295701 MAP4K5Q9Y4K4 846 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 KNL1Q8NG31 2342 aa9.85□□□□□ -0.83
CNOT9-202ENST00000295701 SPAARA0A1B0GVQ0 90 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 E2F8A0AVK6 867 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 TBC1D3BA6NDS4 549 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 EIF3DO15371 548 aaKnown RBP eCLIP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 WIPF1O43516 503 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 HYAL3O43820 417 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 TULP3O75386 442 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 VNN1O95497 513 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 CSRP1P21291 193 aaKnown RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SLC5A3P53794 718 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 FAM193AP78312 1265 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 GAD2Q05329 585 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 TRPC3Q13507 836 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 ANO4Q32M45 955 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 EOGTQ5NDL2 527 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 HECTD3Q5T447 861 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 LCE2CQ5TA81 110 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 EGFLAMQ63HQ2 1017 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SHC4Q6S5L8 630 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 STXBP4Q6ZWJ1 553 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 VASH1Q7L8A9 365 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 ACOT1Q86TX2 421 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 FAM35AQ86V20 835 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 C11orf74Q86VG3 221 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 XXYLT1Q8NBI6 393 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 WHAMMQ8TF30 809 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 GATA6Q92908 595 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SMOQ99835 787 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 C7orf25Q9BPX7 421 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 NUSAP1Q9BXS6 441 aaKnown RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 ELOVL4Q9GZR5 314 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SLC6A17Q9H1V8 727 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 POLMQ9NP87 494 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SLC39A2Q9NP94 309 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.84□□□□□ -0.831e-10■■■■■ 74.5
CNOT9-202ENST00000295701 EVLQ9UI08 416 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 PILRBQ9UKJ0 227 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 SH3BP1Q9Y3L3 701 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 MORC2Q9Y6X9 1032 aaPredicted RBP9.84□□□□□ -0.83
CNOT9-202ENST00000295701 PCDH15Q96QU1 1955 aa9.84□□□□□ -0.83
CNOT9-202ENST00000295701 LAMA5O15230 3695 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 A0A1W2PQF6 199 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 LRRIQ3A6PVS8 624 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 SPTLC2O15270 562 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 GREM1O60565 184 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 PHACTR2O75167 634 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 AP1G2O75843 785 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 RTN3O95197 1032 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 STAU1O95793 577 aaKnown RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 C4BPAP04003 597 aaKnown RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 CFIP05156 583 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 FAM163BP0C2L3 166 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 CCDC130P13994 396 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 GABRG2P18507 467 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 EIF2DP41214 584 aaKnown RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 AFMP43652 599 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 EHHADHQ08426 723 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 CUL4BQ13620 913 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 C10orf76Q5T2E6 689 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 SLC23A3Q6PIS1 610 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 TOGARAM2Q6ZUX3 1019 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 DDX42Q86XP3 938 aaKnown RBP eCLIP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 SYT12Q8IV01 421 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 GRAMD1CQ8IYS0 662 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 FUKQ8N0W3 1084 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 ZNF513Q8N8E2 541 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 KIAA1958Q8N8K9 716 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 C12orf29Q8N999 325 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 KDF1Q8NAX2 398 aaPredicted RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 P2RY11Q96G91 374 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 GTPBP2Q9BX10 602 aaKnown RBP9.83□□□□□ -0.84
CNOT9-202ENST00000295701 SPHK2Q9NRA0 654 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 OSER1Q9NX31 292 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 IL37Q9NZH6 218 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 EHD2Q9NZN4 543 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 TBC1D14Q9P2M4 693 aa9.83□□□□□ -0.84
CNOT9-202ENST00000295701 HMGXB4Q9UGU5 601 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms