RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PGAM1P18669 254 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 SFSWAPQ12872 951 aaKnown RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ADCK1Q86TW2 530 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 L3MBTL3Q96JM7 780 aaPredicted RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ANKRD6Q9Y2G4 727 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 DNAJC16Q9Y2G8 782 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 STK25O00506 426 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 GLP2RO95838 553 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ANXA11P50995 505 aaKnown RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 RIN3Q8TB24 985 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 LRRC39Q96DD0 335 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 VAT1Q99536 393 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 TMEM120AQ9BXJ8 343 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 SEMA4AQ9H3S1 761 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 SLC25A13Q9UJS0 675 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 WNT10BO00744 389 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 TRDMT1O14717 391 aaKnown RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 ZBTB39O15060 712 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 JCHAINP01591 159 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 PYGMP11217 842 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 PPATQ06203 517 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 TRIM69Q86WT6 500 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 SLC9A9Q8IVB4 645 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
PTCD1-201ENST00000292478 MPP6Q9NZW5 540 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 VTI1BQ9UEU0 232 aa13.17□□□□□ -0.3
PTCD1-201ENST00000292478 H3BQF6 201 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 EML1O00423 815 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 PSMD10O75832 226 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 DGKIO75912 1065 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 ARIH2O95376 493 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 ALBP02768 609 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CPA2P48052 419 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 PLD3Q8IV08 490 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CCT7Q99832 543 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 LBHD1Q9BQE6 289 aaPredicted RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 ABHD16BQ9H3Z7 469 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 DDX43Q9NXZ2 648 aaKnown RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 NPM3O75607 178 aaKnown RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 RARAP10276 462 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 GP5P40197 560 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 AQP5P55064 265 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 FBXW4P57775 412 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SLC6A3Q01959 620 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 RRP1BQ14684 758 aaKnown RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 LY6KQ17RY6 165 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CREG2Q8IUH2 290 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 GALNT4Q8N4A0 578 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 PORCNQ9H237 461 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 HAO1Q9UJM8 370 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 FER1L4A9Z1Z3 1794 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 NFASCO94856 1347 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 RIC1Q4ADV7 1423 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SERPIND1P05546 499 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 TPBGLP0DKB5 382 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 MBL2P11226 248 aaPredicted RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 S100A5P33763 92 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 RPL21P46778 160 aaKnown RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 YWHAZP63104 245 aaKnown RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 GTF2BQ00403 316 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 LRRC38Q5VT99 294 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SEPT3Q9UH03 358 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CLCA2Q9UQC9 943 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 RHOCP08134 193 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 HOXB8P17481 243 aaPredicted RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
PTCD1-201ENST00000292478 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 APOPT1Q96IL0 206 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CPNE1Q99829 537 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 CLPBQ9H078 707 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 SLIT3O75094 1523 aa13.16□□□□□ -0.3
PTCD1-201ENST00000292478 TBC1D12O60347 775 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 CRABP2P29373 138 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 RASA2Q15283 850 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 PCBP1Q15365 356 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTCD1-201ENST00000292478 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 TTC30BQ8N4P2 665 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 OSMRQ99650 979 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 SLC12A8A0AV02 714 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 DCDC2CA8MYV0 355 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 APOC4-APOC2K7ER74 178 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 APOC2P02655 101 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 AVPR1AP37288 418 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 PEX5P50542 639 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 RHBDL3P58872 404 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 RCN1Q15293 331 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 HES6Q96HZ4 224 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 CHST12Q9NRB3 414 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 TBC1D23Q9NUY8 699 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 SERPINE1P05121 402 aa13.15□□□□□ -0.3
PTCD1-201ENST00000292478 YY1P25490 414 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms