RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 KCNK16Q96T55 309 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 CAPS2Q9BXY5 557 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 RHOBTB2Q9BYZ6 727 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 ROPN1BQ9BZX4 212 aaPredicted RBP10.59□□□□□ -0.71
C9orf43-201ENST00000288462 CENPHQ9H3R5 247 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 DHX35Q9H5Z1 703 aaKnown RBP10.59□□□□□ -0.71
C9orf43-201ENST00000288462 ROPN1Q9HAT0 212 aaPredicted RBP10.59□□□□□ -0.71
C9orf43-201ENST00000288462 PNPLA8Q9NP80 782 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 DNAJC17Q9NVM6 304 aaKnown RBP10.59□□□□□ -0.71
C9orf43-201ENST00000288462 FZD10Q9ULW2 581 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 VWA8A3KMH1 1905 aa10.59□□□□□ -0.71
C9orf43-201ENST00000288462 CFAP69A5D8W1 941 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 A6NNZ2 444 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 F8W810 466 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 ACSL3O95573 720 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 RDXP35241 583 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 BCAR1P56945 870 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 TUBB8Q3ZCM7 444 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 PPP6R3Q5H9R7 873 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 SYPL2Q5VXT5 272 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 FAM131BQ86XD5 332 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 PPIL6Q8IXY8 311 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 ARFGAP2Q8N6H7 521 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 NAT8LQ8N9F0 302 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 FAM71DQ8N9W8 422 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 EPS8L3Q8TE67 593 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 IRGQQ8WZA9 623 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 CPT1BQ92523 772 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 CSPG4P5Q96PW8 444 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 TMLHEQ9NVH6 421 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 TMEM161AQ9NX61 479 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 PLXNA3P51805 1871 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 BCLAF3A2AJT9 711 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 YJEFN3A6XGL0 299 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 E7ENQ6 273 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 SMAPO00193 183 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 TCEA3O75764 348 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 DDHD2O94830 711 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 ZFXP17010 805 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 YY1P25490 414 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 MAGEA4P43358 317 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 RABGGTBP53611 331 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 BFSP2Q13515 415 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 GPNMBQ14956 572 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 MAPRE1Q15691 268 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 KYNUQ16719 465 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 C1orf228Q6PIY5 440 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 FAM43BQ6ZT52 329 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 ZNF280BQ86YH2 543 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 COLGALT2Q8IYK4 626 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 UHMK1Q8TAS1 419 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 PGAP3Q96FM1 320 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 SLC9A7Q96T83 725 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 ELAC1Q9H777 363 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 USP29Q9HBJ7 922 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 DMAP1Q9NPF5 467 aaPredicted RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 TBC1D13Q9NVG8 400 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 SLC12A6Q9UHW9 1150 aa10.58□□□□□ -0.72
C9orf43-201ENST00000288462 NOVA2Q9UNW9 492 aaKnown RBP10.58□□□□□ -0.72
C9orf43-201ENST00000288462 M0QYT0 321 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 RASGRF2O14827 1237 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 NBNO60934 754 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ZBED1O96006 694 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 AGTP01019 485 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 LTFP02788 710 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ACTN2P35609 894 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ATP1A2P50993 1020 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 CDR1P51861 262 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 AIF1P55008 147 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 MAGOHP61326 146 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PPP2R2AP63151 447 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 TSPY1Q01534 308 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SCAPQ12770 1279 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 XRCC4Q13426 336 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PLEKHG4Q58EX7 1191 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ANKRD22Q5VYY1 191 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PM20D1Q6GTS8 502 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 DARS2Q6PI48 645 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 LRRTM3Q86VH5 581 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 ZC3H18Q86VM9 953 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 CDKL3Q8IVW4 592 aaPredicted RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 THEM5Q8N1Q8 247 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SH3TC2Q8TF17 1288 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 NTAN1Q96AB6 310 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 TTC25Q96NG3 672 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SERPINB12Q96P63 405 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 TMEM209Q96SK2 561 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 UNC93B1Q9H1C4 597 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 SAYSD1Q9NPB0 183 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PAK6Q9NQU5 681 aaPredicted RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 PIGVQ9NUD9 493 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 RRN3Q9NYV6 651 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 CWC15Q9P013 229 aaKnown RBP10.57□□□□□ -0.72
C9orf43-201ENST00000288462 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
C9orf43-201ENST00000288462 NAALADL1Q9UQQ1 740 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms