RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 FAM183BPQ6ZVS7 135 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 NET1Q7Z628 596 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 CRLF3Q8IUI8 442 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 ULK2Q8IYT8 1036 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 NDUFAF2Q8N183 169 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 HEXIM2Q96MH2 286 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 RILPQ96NA2 401 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 PTPRHQ9HD43 1115 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 HBS1LQ9Y450 684 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 SSC5DA1L4H1 1573 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 TRDMT1O14717 391 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 CIB2O75838 187 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 KRT38O76015 456 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 TM7SF2O76062 418 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 IL4RP24394 825 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 CACNA2D1P54289 1103 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 MXD4Q14582 209 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 DCAF15Q66K64 600 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 SLC30A9Q6PML9 568 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 EEPD1Q7L9B9 569 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 PQLC3Q8N755 202 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 RTP4Q96DX8 246 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 EBF4Q9BQW3 602 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 FRMD8Q9BZ67 464 aaPredicted RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 RPF1Q9H9Y2 349 aaKnown RBP13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 C2CD2Q9Y426 696 aa13.73□□□□□ -0.21
SLC28A1-201ENST00000286749 HMX2A2RU54 273 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 PRR5-ARHGAP8B1AHC4 643 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 F8W8V4 182 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 APOL1O14791 398 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 ANPEPP15144 967 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 CALRP27797 417 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 IRX4P78413 519 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 ARHGAP8P85298 464 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 UBAP2LQ14157 1087 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 MPP5Q8N3R9 675 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 TRAPPC12Q8WVT3 735 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 SEPT1Q8WYJ6 367 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 CCDC106Q9BWC9 280 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 C2orf40Q9H1Z8 148 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 CDT1Q9H211 546 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 MKS1Q9NXB0 559 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 SLC7A8Q9UHI5 535 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 MEI4A8MW99 385 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 ZBTB42B2RXF5 422 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 SNNO75324 88 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 BPGMP07738 259 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 CBLBQ13191 982 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 LY6KQ17RY6 165 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 TRMT5Q32P41 509 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 C6orf163Q5TEZ5 329 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 MAP1SQ66K74 1059 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 MAP7D3Q8IWC1 876 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 PCDH19Q8TAB3 1148 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 GATA6Q92908 595 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 IFT43Q96FT9 208 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 PDGFDQ9GZP0 370 aaPredicted RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 NGRNQ9NPE2 291 aaKnown RBP13.72□□□□□ -0.21
SLC28A1-201ENST00000286749 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 LACTBL1A8MY62 500 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 ACKR2O00590 384 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 UBTFL6P0CB48 400 aaPredicted RBP13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 CYP3A5P20815 502 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 STX3Q13277 289 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 CA9Q16790 459 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 DNAL1Q4LDG9 190 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 C1orf146Q5VVC0 180 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 FOXB2Q5VYV0 432 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 JADE1Q6IE81 842 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 MYLK4Q86YV6 388 aaPredicted RBP13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 SLC25A41Q8N5S1 370 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 STKLD1Q8NE28 680 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 SH3GL3Q99963 347 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 PCDH18Q9HCL0 1135 aa13.71□□□□□ -0.21
SLC28A1-201ENST00000286749 BCLAF3A2AJT9 711 aaKnown RBP13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 MAGEA13PA6NCF6 341 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 C19orf81C9J6K1 198 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 USP1O94782 785 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 IL18RAPO95256 599 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 BAG2O95816 211 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 VDRP11473 427 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 TGM2P21980 687 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 CRHR1P34998 444 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 RGS7P49802 495 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 PAPOLAP51003 745 aaKnown RBP13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 ACTR3P61158 418 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 C11orf91Q3C1V1 193 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 CCDC14Q49A88 953 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 ZNF534Q76KX8 674 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 CCDC33Q8N5R6 958 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 GSDMBQ8TAX9 411 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 APBB2Q92870 758 aa13.71□□□□□ -0.22
SLC28A1-201ENST00000286749 MTBPQ96DY7 904 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms