RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 LMO2P25791 158 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 PEX19P40855 299 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 FCGRTP55899 365 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 GEMIN4P57678 1058 aaKnown RBP19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 CTC1Q2NKJ3 1217 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 OR6B3Q8NGW1 331 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 TTC8Q8TAM2 541 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 STOML1Q9UBI4 398 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 CDY2AQ9Y6F7 541 aa19.04■□□□□ 0.64
PDLIM3-201ENST00000284767 RALGAPA2Q2PPJ7 1873 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 A0A1W2PPM1 405 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 HMGCRP04035 888 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 ZSCAN5DPP0CG00 497 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 FGFR1P11362 822 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 CCND3P30281 292 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 GJA9P57773 515 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 CACNB2Q08289 660 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 TAF5Q15542 800 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 FAM102AQ5T9C2 384 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 TRNP1Q6NT89 227 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 APBB1IPQ7Z5R6 666 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 TTC30AQ86WT1 665 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 NPHS2Q9NP85 383 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 PCSK1NQ9UHG2 260 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 DERAQ9Y315 318 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 LRRD1A4D1F6 860 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 CCDC22O60826 627 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 ENTPD5O75356 428 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 KRT4P19013 534 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 PTPN7P35236 360 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 CTCFP49711 727 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 PIGHQ14442 188 aaPredicted RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 LRRC38Q5VT99 294 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 PMF1Q6P1K2 205 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 C4orf50Q6ZRC1 276 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 MTDHQ86UE4 582 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 YIPF3Q9GZM5 350 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 GTF2IRD1Q9UHL9 959 aa19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 UBQLN1Q9UMX0 589 aaKnown RBP19.03■□□□□ 0.64
PDLIM3-201ENST00000284767 TM9SF1O15321 606 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 GNAT1P11488 350 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 AXLP30530 894 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 PHBP35232 272 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 VCPP55072 806 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 KLC1Q07866 573 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 PDIA2Q13087 525 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 MFSD14CQ5VZR4 134 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 LCLAT1Q6UWP7 414 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 PCGF5Q86SE9 256 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 NKD2Q969F2 451 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 MTG1Q9BT17 334 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 PCDH9Q9HC56 1237 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 DPPA5A6NC42 116 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 H0Y3Z8 333 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 ITGAVP06756 1048 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 OASLQ15646 514 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 SEPT7Q16181 437 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 FBXO47Q5MNV8 452 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 HP1BP3Q5SSJ5 553 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 OR6B2Q6IFH4 312 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 FAM183BPQ6ZVS7 135 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 KBTBD7Q8WVZ9 684 aa19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 ALKBH8Q96BT7 664 aaKnown RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 SAE1Q9UBE0 346 aaPredicted RBP19.02■□□□□ 0.64
PDLIM3-201ENST00000284767 A8MXQ7 604 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 PIRO00625 290 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 AHCYL1O43865 530 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 FESP07332 822 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 CD48P09326 243 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 ETS1P14921 441 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 MRPS6P82932 125 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 SLC25A11Q02978 314 aaKnown RBP19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 PCBP1Q15365 356 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 MUM1Q2TAK8 710 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 SPOCD1Q6ZMY3 1216 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 CAPN12Q6ZSI9 719 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 LPPQ93052 612 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 MCRS1Q96EZ8 462 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 SH3GL3Q99963 347 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 VPS11Q9H270 941 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 RABGEF1Q9UJ41 708 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 SCN10AQ9Y5Y9 1956 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 GABBR2O75899 941 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 CCDC130P13994 396 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 VHLP40337 213 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 TAP1Q03518 808 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 LRRC52Q8N7C0 313 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 NIPA2Q8N8Q9 360 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 MIPEPQ99797 713 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 BTBD10Q9BSF8 475 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 B3GNT5Q9BYG0 378 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 ST3GAL5Q9UNP4 418 aa19.01■□□□□ 0.63
PDLIM3-201ENST00000284767 KPNA7A9QM74 516 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 PTGESO14684 152 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 NVLO15381 856 aaKnown RBP19■□□□□ 0.63
PDLIM3-201ENST00000284767 CHRNA1P02708 482 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 ADRA1DP25100 572 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 GABRB2P47870 512 aa19■□□□□ 0.63
PDLIM3-201ENST00000284767 GPX6P59796 221 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms