RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 VEGFBP49765 207 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PLTPP55058 493 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PRKD1Q15139 912 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SMARCD1Q96GM5 515 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PAAF1Q9BRP4 392 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 CDC42EP4Q9H3Q1 356 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 FAM49BQ9NUQ9 324 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 COMMD8Q9NX08 183 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 TMEM161AQ9NX61 479 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 DDX43Q9NXZ2 648 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 ATXN2Q99700 1313 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 ATP2C2O75185 946 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PARNO95453 639 aaKnown RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 ATF2P15336 505 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 PCSK1P29120 753 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 SDC4P31431 198 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 HTR7P34969 479 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 CACNA2D1P54289 1103 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 OR6B2Q6IFH4 312 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 RIBC1Q8N443 379 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 QKIQ96PU8 341 aaKnown RBP eCLIP10.58□□□□□ -0.722e-6■■■■■ 30.1
SEC24D-201ENST00000280551 FRMD8Q9BZ67 464 aaPredicted RBP10.58□□□□□ -0.72
SEC24D-201ENST00000280551 VPS18Q9P253 973 aa10.58□□□□□ -0.72
SEC24D-201ENST00000280551 GOLGA6CA6NDK9 693 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 HACD1B0YJ81 288 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 GOLGA6DP0CG33 693 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 ZFXP17010 805 aaPredicted RBP10.57□□□□□ -0.72
SEC24D-201ENST00000280551 MAGEA11P43364 429 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 ZNF33AQ06730 810 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 GIMAP7Q8NHV1 300 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CPT1BQ92523 772 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 LPPQ93052 612 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 FATE1Q969F0 183 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 KCTD15Q96SI1 283 aaPredicted RBP10.57□□□□□ -0.72
SEC24D-201ENST00000280551 ADAM2Q99965 735 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 HEMGNQ9BXL5 484 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 HMX1Q9NP08 348 aaPredicted RBP10.57□□□□□ -0.72
SEC24D-201ENST00000280551 GOLGA6AQ9NYA3 693 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 NINJ2Q9NZG7 142 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 KANSL3Q9P2N6 904 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 USTQ9Y2C2 406 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 SYN3O14994 580 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CHADO15335 359 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CST8O60676 142 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 AGTP01019 485 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 SHBGP04278 402 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 GDF10P55107 478 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CA9Q16790 459 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 MANEALQ5VSG8 457 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CYS1Q717R9 158 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 NRDE2Q9H7Z3 1164 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 POPDC2Q9HBU9 364 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 ARHGEF38Q9NXL2 777 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 C5orf60A6NFR6 353 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 DCDC2CA8MYV0 355 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 DCLK1O15075 740 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 NBNO60934 754 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CXCR3P49682 368 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 TNK2Q07912 1038 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 HLTFQ14527 1009 aaKnown RBP eCLIP10.57□□□□□ -0.722e-6■■■■□ 23.7
SEC24D-201ENST00000280551 ARHGEF6Q15052 776 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 MAPRE1Q15691 268 aaKnown RBP10.57□□□□□ -0.72
SEC24D-201ENST00000280551 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 RNF169Q8NCN4 708 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 MCUQ8NE86 351 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 FAM76AQ8TAV0 307 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 FUBP3Q96I24 572 aaKnown RBP eCLIP10.57□□□□□ -0.721e-8■■■■□ 24
SEC24D-201ENST00000280551 TTC25Q96NG3 672 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CASD1Q96PB1 797 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 TMEM175Q9BSA9 504 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 CFAP54Q96N23 3096 aa10.57□□□□□ -0.72
SEC24D-201ENST00000280551 I6L893 689 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 FAM200BP0CF97 657 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 GHRP10912 638 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 SELPP16109 830 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 GLUD2P49448 558 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 YWHAZP63104 245 aaKnown RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 C6orf118Q5T5N4 469 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 OR10T2Q8NGX3 314 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 ZNF296Q8WUU4 475 aaPredicted RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 GLT1D1Q96MS3 346 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 TOX2Q96NM4 488 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 SH3BP1Q9Y3L3 701 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 MYBPHLA2RUH7 354 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 MYO1CO00159 1063 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 PRPSAP2O60256 369 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 CACNG3O60359 315 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 FGFR3P22607 806 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 AUHQ13825 339 aaKnown RBP10.56□□□□□ -0.72
SEC24D-201ENST00000280551 SLC29A2Q14542 456 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 TCTN1Q2MV58 587 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 IZUMO3Q5VZ72 239 aa10.56□□□□□ -0.72
SEC24D-201ENST00000280551 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms