RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 A0A0A0MRY4 1105 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 HHLA1C9JL84 531 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 ZBTB24O43167 697 aaPredicted RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 CACNG3O60359 315 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 KRT37O76014 449 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 NTSR1P30989 418 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 PTGER3P43115 390 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 MXI1P50539 228 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 ADAM9Q13443 819 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 LYSMD4Q5XG99 296 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 SDE2Q6IQ49 451 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 KRBA2Q6ZNG9 492 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 TADA2BQ86TJ2 420 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 CHPFQ8IZ52 775 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 GUF1Q8N442 669 aaKnown RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 CCDC34Q96HJ3 373 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 GOLPH3LQ9H4A5 285 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.44□□□□□ -0.26
CD44-203ENST00000278386 CALCOCO1Q9P1Z2 691 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
CD44-203ENST00000278386 RASAL2Q9UJF2 1139 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 DNMT3LQ9UJW3 386 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
CD44-203ENST00000278386 CHD8Q9HCK8 2581 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 AP5Z1O43299 807 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 CFIP05156 583 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 EPB41P11171 864 aaKnown RBP13.43□□□□□ -0.26
CD44-203ENST00000278386 RALAP11233 206 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 GABRG2P18507 467 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 MAPK8P45983 427 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 DGKGP49619 791 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 IRX4P78413 519 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 LMAN2Q12907 356 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 MAP7D1Q3KQU3 841 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 SH3PXD2AQ5TCZ1 1133 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 KRT39Q6A163 491 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 TOGARAM2Q6ZUX3 1019 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 SYT12Q8IV01 421 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 SMYD4Q8IYR2 804 aaPredicted RBP13.43□□□□□ -0.26
CD44-203ENST00000278386 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 EEF2KMTQ96G04 330 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 DUSP16Q9BY84 665 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 SCAND2PQ9GZW5 306 aaPredicted RBP13.43□□□□□ -0.26
CD44-203ENST00000278386 PLK2Q9NYY3 685 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 MARK1Q9P0L2 795 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 WDR35Q9P2L0 1181 aa13.43□□□□□ -0.26
CD44-203ENST00000278386 EVLQ9UI08 416 aaPredicted RBP13.43□□□□□ -0.26
CD44-203ENST00000278386 KMT2BQ9UMN6 2715 aaPredicted RBP13.42□□□□□ -0.26
CD44-203ENST00000278386 FAM237AA0A1B0GTK4 181 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 A0A1W2PQ27 194 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 A0A1W2PQ64 194 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 A0A1W2PQD8 194 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 GIPC1O14908 333 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 GREM1O60565 184 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 HMBSP08397 361 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 ITPKAP23677 461 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 DPP6P42658 865 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 PLA2G4AP47712 749 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 PSEN1P49768 467 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 KIF11P52732 1056 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 ENPEPQ07075 957 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 FOXC1Q12948 553 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 DCAF17Q5H9S7 520 aaPredicted RBP13.42□□□□□ -0.26
CD44-203ENST00000278386 TCERG1LQ5VWI1 586 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 KLHDC10Q6PID8 442 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 SLC36A4Q6YBV0 504 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 DEFB119Q8N690 84 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 HEXIM2Q96MH2 286 aaKnown RBP13.42□□□□□ -0.26
CD44-203ENST00000278386 CDK5RAP1Q96SZ6 601 aaKnown RBP13.42□□□□□ -0.26
CD44-203ENST00000278386 ACOX2Q99424 681 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 CACNA2D2Q9NY47 1150 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 CYP8B1Q9UNU6 501 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 ZDHHC9Q9Y397 364 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 STARD13Q9Y3M8 1113 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 RAD54BQ9Y620 910 aa13.42□□□□□ -0.26
CD44-203ENST00000278386 PCDH15Q96QU1 1955 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 CKAP5Q14008 2032 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 A0A1W2PQF6 199 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 PRRT4C9JH25 899 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 CDX4O14627 284 aaPredicted RBP13.41□□□□□ -0.26
CD44-203ENST00000278386 CETN3O15182 167 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 STX10O60499 249 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 STC2O76061 302 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 ZNF202O95125 648 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 ENGP17813 658 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 NDUFV2P19404 249 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
CD44-203ENST00000278386 GTF2H1P32780 548 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 ATXN3P54252 364 aaPredicted RBP13.41□□□□□ -0.26
CD44-203ENST00000278386 SLC8A3P57103 927 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 SHC2P98077 582 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 EFEMP1Q12805 493 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 EDRF1Q3B7T1 1238 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 ZCWPW2Q504Y3 356 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 SPDYCQ5MJ68 293 aa13.41□□□□□ -0.26
CD44-203ENST00000278386 KIAA1324Q6UXG2 1013 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms