RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CLSTN3Q9BQT9 956 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GCOM2Q9BZD3 368 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CLPBQ9H078 707 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 RUBCNLQ9H714 662 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CYP4F11Q9HBI6 524 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SSU72Q9NP77 194 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GMIPQ9P107 970 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 NIP7Q9Y221 180 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 TRIM64BA6NI03 449 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 B8ZZF3 427 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GOLGA8RI6L899 631 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SPOPO43791 374 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SORBS3O60504 671 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 ERBB2P04626 1255 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 ALOX5P09917 674 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 COL6A1P12109 1028 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 WEE1P30291 646 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 HSPA13P48723 471 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 OTUD4Q01804 1114 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 TRAF2Q12933 501 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 DNASE1L3Q13609 305 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 VPS72Q15906 364 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GPR107Q5VW38 600 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 SLFN13Q68D06 897 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 PPP4R4Q6NUP7 873 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 IFNL3Q8IZI9 196 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 LILRA2Q8N149 483 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CCDC89Q8N998 374 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 GALNT6Q8NCL4 622 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 CATSPER1Q8NEC5 780 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 KBTBD7Q8WVZ9 684 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 PMEPA1Q969W9 287 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 DCPSQ96C86 337 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 MAP6Q96JE9 813 aa9.53□□□□□ -0.88
PDGFC-201ENST00000274071 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 EPB41L4AQ9HCS5 686 aaPredicted RBP9.53□□□□□ -0.88
PDGFC-201ENST00000274071 ARHGEF35A5YM69 484 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 M0QX08 132 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 NUAK1O60285 661 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 KRT6AP02538 564 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 KRT6BP04259 564 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 DLATP10515 647 aaKnown RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 TGM1P22735 817 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 IL32P24001 234 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 IDUAP35475 653 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 HPCAL1P37235 193 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 MCAMP43121 646 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 KCNQ4P56696 695 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 EIF3EP60228 445 aaKnown RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 TXNL4AP83876 142 aaKnown RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 PRKCEQ02156 737 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 ADGRE1Q14246 886 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 GALNT7Q86SF2 657 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 TERB1Q8NA31 727 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 NEDD1Q8NHV4 660 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 ZNF420Q8TAQ5 688 aaPredicted RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 RMND5BQ96G75 393 aaPredicted RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 STRBPQ96SI9 672 aaKnown RBP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.52□□□□□ -0.88
PDGFC-201ENST00000274071 PLEKHA5Q9HAU0 1116 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 NEK6Q9HC98 313 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 RIMS3Q9UJD0 308 aa9.52□□□□□ -0.88
PDGFC-201ENST00000274071 C7orf72A4D263 438 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 FAM172BPA6NC97 362 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 H3BUI4 141 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 SLC22A1O15245 554 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 TM9SF1O15321 606 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 ATF2P15336 505 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 AOC1P19801 751 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 RFC1P35251 1148 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 MLLT10P55197 1068 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 GALNT1Q10472 559 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 PTK6Q13882 451 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 TFDP1Q14186 410 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 TBCCQ15814 346 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 ZNF746Q6NUN9 644 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 OTOP3Q7RTS5 596 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 ANKS1BQ7Z6G8 1248 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 SNX29P2Q8IUI4 249 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 ZC3H7AQ8IWR0 971 aaKnown RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 FBXW8Q8N3Y1 598 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 KLF6Q99612 283 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 COPS7BQ9H9Q2 264 aaPredicted RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 CHST7Q9NS84 486 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 TAS2R14Q9NYV8 317 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 SERPINA10Q9UK55 444 aa9.52□□□□□ -0.89
PDGFC-201ENST00000274071 APOBEC2Q9Y235 224 aaKnown RBP9.52□□□□□ -0.89
PDGFC-201ENST00000274071 SNAP91O60641 907 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 KRT10P13645 584 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 COMTP21964 271 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 DCKP27707 260 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 NMT1P30419 496 aaKnown RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 MARSP56192 900 aaKnown RBP9.51□□□□□ -0.89
PDGFC-201ENST00000274071 JAM2P57087 298 aa9.51□□□□□ -0.89
PDGFC-201ENST00000274071 IFITM3Q01628 133 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms