RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 CDH23Q9H251 3354 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 SRRM3A6NNA2 597 aaPredicted RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 ADAM12O43184 909 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 FBXO21O94952 628 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 FSBPO95073 299 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 KDELR1P24390 212 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DR1Q01658 176 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 MMRN1Q13201 1228 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 NNTQ13423 1086 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CYP1B1Q16678 543 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 KCNT2Q6UVM3 1135 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 YTHDF3Q7Z739 585 aaKnown RBP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 FAM131BQ86XD5 332 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 DDX42Q86XP3 938 aaKnown RBP eCLIP13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CCDC185Q8N715 623 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 KCTD6Q8NC69 237 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CASKIN2Q8WXE0 1202 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 GDAP1L1Q96MZ0 367 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 SLC2A13Q96QE2 648 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 TRIM31Q9BZY9 425 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 CRISPLD1Q9H336 500 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 POPDC2Q9HBU9 364 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 IL23AQ9NPF7 189 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
CAPN9-201ENST00000271971 VNN2O95498 520 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CHRNA3P32297 505 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CARSP49589 748 aaKnown RBP13.04□□□□□ -0.32
CAPN9-201ENST00000271971 PGFP49763 221 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 EPHB4P54760 987 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CDH6P55285 790 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 GNGT1P63211 74 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 ELAVL2Q12926 359 aaKnown RBP13.04□□□□□ -0.32
CAPN9-201ENST00000271971 EMBQ6PCB8 327 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 RNF19BQ6ZMZ0 732 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 ARCQ7LC44 396 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 C7orf61Q8IZ16 206 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 IFT81Q8WYA0 676 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CENPIQ92674 756 aaPredicted RBP13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CAVIN3Q969G5 261 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 YME1L1Q96TA2 773 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 TMPRSS4Q9NRS4 437 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 SAE1Q9UBE0 346 aaPredicted RBP13.04□□□□□ -0.32
CAPN9-201ENST00000271971 SLC27A5Q9Y2P5 690 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 CDY1Q9Y6F8 540 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 PLXNA3P51805 1871 aa13.04□□□□□ -0.32
CAPN9-201ENST00000271971 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CAPN9O14815 690 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CAPN15O75808 1086 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 LTFP02788 710 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 NCAM1P13591 858 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 SYN1P17600 705 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 COILP38432 576 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 NME3Q13232 169 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 NFE2Q16621 373 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 SLC25A52Q3SY17 297 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 ZNF365Q70YC5 407 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 JAMLQ86YT9 394 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 C12orf50Q8NA57 414 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CMASQ8NFW8 434 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CCDC26Q8TAB7 109 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 DCLK3Q9C098 648 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CXXC1Q9P0U4 656 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 PCDHB5Q9Y5E4 795 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 M0QYT0 321 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 TNFRSF10BO14763 440 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CLGNO14967 610 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 TBC1D4O60343 1298 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 EFEMP2O95967 443 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 DESP17661 470 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 NOS2P35228 1153 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CETN2P41208 172 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 PTGIRP43119 386 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 FNTAP49354 379 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 EP400NLQ6ZTU2 488 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 MAATS1Q7Z4T9 603 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CCDC105Q8IYK2 499 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 NPY6RQ99463 290 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 PNPLA8Q9NP80 782 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 PIGVQ9NUD9 493 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 PRKAG2Q9UGJ0 569 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 CEP290O15078 2479 aa13.03□□□□□ -0.32
CAPN9-201ENST00000271971 COL4A4P53420 1690 aaPredicted RBP13.03□□□□□ -0.32
CAPN9-201ENST00000271971 KIF1CO43896 1103 aaKnown RBP13.02□□□□□ -0.32
CAPN9-201ENST00000271971 TJP3O95049 919 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 PTPN7P35236 360 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 COPS2P61201 443 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 DPYSL3Q14195 570 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 KRT81Q14533 505 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 PSMD5Q16401 504 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 PPP2R5EQ16537 467 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 PPP6R3Q5H9R7 873 aaPredicted RBP13.02□□□□□ -0.32
CAPN9-201ENST00000271971 MICALCLQ6ZW33 695 aa13.02□□□□□ -0.32
CAPN9-201ENST00000271971 ANKS3Q6ZW76 656 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms