RNA–Protein interactions for RNA: ENST00000265140.9

SLF1-201, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLF1, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-201ENST00000265140 LAMB3Q13751 1172 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 VEPH1Q14D04 833 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 PID1Q7Z2X4 250 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 EFL1Q7Z2Z2 1120 aaKnown RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 ZSCAN18Q8TBC5 510 aaPredicted RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 SPATA18Q8TC71 538 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 VPS33AQ96AX1 596 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 MOV10L1Q9BXT6 1211 aaKnown RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 TMEM39BQ9GZU3 492 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 TBX20Q9UMR3 447 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 REXO2Q9Y3B8 237 aaKnown RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 LOC102724159A0A0B4J2E5 919 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 RGL2O15211 777 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 PSMD3O43242 534 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 ADCY6O43306 1168 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 ZNF862O60290 1169 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 MOCS2O96007 188 aaPredicted RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 GSTM1P09488 218 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 MYBL2P10244 700 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 CLUP10909 449 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 IL1R1P14778 569 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 NME3Q13232 169 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 PWP2Q15269 919 aaKnown RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 TRIP10Q15642 601 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 ERMARDQ5T6L9 678 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 ZNF662Q6ZS27 426 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 RANBP17Q9H2T7 1088 aaKnown RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 COPS7BQ9H9Q2 264 aaPredicted RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 LATS2Q9NRM7 1088 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 PSMC3IPQ9P2W1 217 aaPredicted RBP6.97□□□□□ -1.29
SLF1-201ENST00000265140 TMX2Q9Y320 296 aa6.97□□□□□ -1.29
SLF1-201ENST00000265140 SF3B1O75533 1304 aaKnown RBP eCLIP6.96□□□□□ -1.296e-6■■■■■ 77.8
SLF1-201ENST00000265140 A8MXQ7 604 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 TCN1P20061 433 aaPredicted RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 RXRBP28702 533 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 ITGA1P56199 1179 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 PRKCEQ02156 737 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 MTMR2Q13614 643 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 ADRM1Q16186 407 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 ZRANB3Q5FWF4 1079 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 PLEKHA7Q6IQ23 1121 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 LIN54Q6MZP7 749 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 FOXR1Q6PIV2 292 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 MARK2Q7KZI7 788 aaKnown RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 NT5DC3Q86UY8 548 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 CAMK1DQ8IU85 385 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 CDK20Q8IZL9 346 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 CCDC185Q8N715 623 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 SHCBP1Q8NEM2 672 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 INPP4AQ96PE3 977 aaPredicted RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 CDC42EP4Q9H3Q1 356 aaKnown RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 CXorf56Q9H5V9 222 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 NOL6Q9H6R4 1146 aaKnown RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 MARK1Q9P0L2 795 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 TJP2Q9UDY2 1190 aa6.96□□□□□ -1.29
SLF1-201ENST00000265140 PNMA8BQ9ULN7 279 aaPredicted RBP6.96□□□□□ -1.29
SLF1-201ENST00000265140 CCDC162PA2VCL2 907 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 FAM86B1E9PN63 330 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 SMAPO00193 183 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 BTN3A3O00478 584 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ATP9BO43861 1147 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 IFNA14P01570 189 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 CNPP09543 421 aaKnown RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 WEE2P0C1S8 567 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 FAM86B2P0C5J1 330 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 HSMCR30P0CW71 290 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 GNAT1P11488 350 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 NPTX2P47972 431 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ERFP50548 548 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 RHBDL3P58872 404 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ABATP80404 500 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 SMAD1Q15797 465 aaKnown RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 TMEM119Q4V9L6 283 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 CLYBLQ8N0X4 340 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 RIBC1Q8N443 379 aaPredicted RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 BAP1Q92560 729 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 HAS1Q92839 578 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ATG4CQ96DT6 458 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 OTUD5Q96G74 571 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 WNK4Q96J92 1243 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 AP1S3Q96PC3 154 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 CAMKK2Q96RR4 588 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ECSITQ9BQ95 431 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 LBHD1Q9BQE6 289 aaPredicted RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 NIF3L1Q9GZT8 377 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 CAB39LQ9H9S4 337 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 NEK6Q9HC98 313 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 AGAP1Q9UPQ3 857 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 ATF5Q9Y2D1 282 aaPredicted RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 POLRMTO00411 1230 aaKnown RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 KPNA5O15131 536 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 NDUFS3O75489 264 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 SGPL1O95470 568 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 PRKCBP05771 671 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 STIP1P31948 543 aaKnown RBP6.96□□□□□ -1.3
SLF1-201ENST00000265140 LPIN1Q14693 890 aa6.96□□□□□ -1.3
SLF1-201ENST00000265140 OLFML2AQ68BL7 652 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms