RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CHST7Q9NS84 486 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 RBM22Q9NW64 420 aaKnown RBP eCLIP14.43□□□□□ -0.1
CDH3-201ENST00000264012 ROBO3Q96MS0 1386 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 HEATR9A2RTY3 570 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 TRPC5OSA6NMA1 111 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 ATXN3P54252 364 aaPredicted RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 CNGA3Q16281 694 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 ARSHQ5FYA8 562 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 ADCK2Q7Z695 626 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 AENQ8WTP8 325 aaKnown RBP14.43□□□□□ -0.1
CDH3-201ENST00000264012 VAV3Q9UKW4 847 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 PCDHB5Q9Y5E4 795 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 TRPV2Q9Y5S1 764 aa14.43□□□□□ -0.1
CDH3-201ENST00000264012 PIK3C2AO00443 1686 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 TGFB1I1O43294 461 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 TCN1P20061 433 aaPredicted RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 CNTFP26441 200 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 TARSP26639 723 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 GLRBP48167 497 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 MGAT5Q09328 741 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 DYNC1I2Q13409 638 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 ACAP1Q15027 740 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 UGCGQ16739 394 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH3-201ENST00000264012 KATNAL2Q8IYT4 538 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 LNX1Q8TBB1 728 aaPredicted RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 SHC3Q92529 594 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 DMAP1Q9NPF5 467 aaPredicted RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 GDF3Q9NR23 364 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 MON2Q7Z3U7 1717 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 LOC102724159A0A0B4J2E5 919 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 PDE2AO00408 941 aaPredicted RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 CLASP2O75122 1294 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 HOXC6P09630 235 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 CSE1LP55060 971 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 PWP2Q15269 919 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 SGO1Q5FBB7 561 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 ADAM32Q8TC27 787 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 GAD1Q99259 594 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 TRIM45Q9H8W5 580 aaPredicted RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 VANGL2Q9ULK5 521 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 RUVBL2Q9Y230 463 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 DRG1Q9Y295 367 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 RCCD1A6NED2 376 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 ENDOD1O94919 500 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 CCDC130P13994 396 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 DDX5P17844 614 aaKnown RBP14.42□□□□□ -0.1
CDH3-201ENST00000264012 FOXR2Q6PJQ5 311 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 HTR3CQ8WXA8 447 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 NRCAMQ92823 1304 aa14.42□□□□□ -0.1
CDH3-201ENST00000264012 RHOCP08134 193 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 NFICP08651 508 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 COPAP53621 1224 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 ITIH4Q14624 930 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 TTLL9Q3SXZ7 439 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 LAYNQ6UX15 382 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 CDT1Q9H211 546 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 FBXO44Q9H4M3 255 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 SLC40A1Q9NP59 571 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 VPS28Q9UK41 221 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 ASTN2O75129 1339 aaPredicted RBP14.41□□□□□ -0.1
CDH3-201ENST00000264012 AKAP10O43572 662 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 SKAP2O75563 359 aaPredicted RBP14.41□□□□□ -0.1
CDH3-201ENST00000264012 SERPIND1P05546 499 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 CCND1P24385 295 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 HDAC4P56524 1084 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 ZNF844Q08AG5 666 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 AARS2Q5JTZ9 985 aaKnown RBP14.41□□□□□ -0.1
CDH3-201ENST00000264012 UGT3A1Q6NUS8 523 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 MOB2Q70IA6 237 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 DEFB128Q7Z7B8 93 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 CARNMT1Q8N4J0 409 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 COG4Q9H9E3 785 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 TLR8Q9NR97 1041 aaKnown RBP14.41□□□□□ -0.1
CDH3-201ENST00000264012 PLPPR4Q7Z2D5 763 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 LZICQ8WZA0 190 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 KLRG1Q96E93 195 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 YME1L1Q96TA2 773 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 YIPF3Q9GZM5 350 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 PDGFCQ9NRA1 345 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 ACOT9Q9Y305 439 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 APOC4-APOC2K7ER74 178 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 VPS26AO75436 327 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 APOC2P02655 101 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 MAMLD1Q13495 774 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 TRIP10Q15642 601 aa14.41□□□□□ -0.1
CDH3-201ENST00000264012 CASZ1Q86V15 1759 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 RASSF10A6NK89 507 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 KCNK1O00180 336 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 SSTR1P30872 391 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
CDH3-201ENST00000264012 NR2C2P49116 596 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 NCKAP1LP55160 1127 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 KCNK10P57789 538 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 RTP1P59025 263 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 CNGA2Q16280 664 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 ZACNQ401N2 412 aa14.4□□□□□ -0.1
CDH3-201ENST00000264012 MARC1Q5VT66 337 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms