RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 NIPA2Q8N8Q9 360 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 CLMNQ96JQ2 1002 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ACO2Q99798 780 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 IFT122Q9HBG6 1241 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 XAB2Q9HCS7 855 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ETNK2Q9NVF9 386 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 PAK5Q9P286 719 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 MSCO60682 206 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 HOXC6P09630 235 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 DHRS4L1P0CG22 281 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 STIP1P31948 543 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 SLC18A2Q05940 514 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ASPHQ12797 758 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 LBRQ14739 615 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 GRAMD1BQ3KR37 738 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 FASTKD1Q53R41 847 aaKnown RBP12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ATF7IP2Q5U623 682 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 FOXB2Q5VYV0 432 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 HACE1Q8IYU2 909 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF280CQ8ND82 737 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 KCNK4Q9NYG8 393 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 KCNG1Q9UIX4 513 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 TRIP11Q15643 1979 aa12.84□□□□□ -0.35
CHMP3-201ENST00000263856 CCDC160A6NGH7 325 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 NPTXRO95502 500 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 APOEP02649 317 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 PROCP04070 461 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 FESP07332 822 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 PTPN7P35236 360 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 OCRLQ01968 901 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 HSF5Q4G112 596 aaPredicted RBP12.83□□□□□ -0.35
CHMP3-201ENST00000263856 OR52E8Q6IFG1 317 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 WDR75Q8IWA0 830 aaKnown RBP12.83□□□□□ -0.35
CHMP3-201ENST00000263856 STKLD1Q8NE28 680 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 FLAD1Q8NFF5 587 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 FAM172AQ8WUF8 416 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 CPB2Q96IY4 423 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 EBF3Q9H4W6 596 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 POPDC2Q9HBU9 364 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 MAN1C1Q9NR34 630 aa12.83□□□□□ -0.35
CHMP3-201ENST00000263856 MAFBQ9Y5Q3 323 aaPredicted RBP12.83□□□□□ -0.35
CHMP3-201ENST00000263856 METTL18O95568 372 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 SAT1P21673 171 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 CUL3Q13618 768 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 KRT72Q14CN4 511 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 AMHR2Q16671 573 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 N4BP2L1Q5TBK1 243 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-201ENST00000263856 MAP7D3Q8IWC1 876 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 SCUBE3Q8IX30 993 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 UBR7Q8N806 425 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 SLC4A11Q8NBS3 891 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 XYLT2Q9H1B5 865 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 PCDHGC3Q9UN70 934 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 HBS1LQ9Y450 684 aaKnown RBP12.83□□□□□ -0.36
CHMP3-201ENST00000263856 CCDC78A2IDD5 438 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 WDR27A2RRH5 827 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 KIF3CO14782 793 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 DNAJC6O75061 913 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 RFPL1O75677 317 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 TGDSO95455 350 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 LYNP07948 512 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 ADORA2AP29274 412 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 GTF2A2P52657 109 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 GBE1Q04446 702 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 JADE1Q6IE81 842 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 TRNP1Q6NT89 227 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 CAND1Q86VP6 1230 aaKnown RBP12.83□□□□□ -0.36
CHMP3-201ENST00000263856 TRIM42Q8IWZ5 723 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 PLD5Q8N7P1 536 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 TMEM176AQ96HP8 235 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 RNF157Q96PX1 679 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 ECSITQ9BQ95 431 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 B3GNT5Q9BYG0 378 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 PNPOQ9NVS9 261 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 HACL1Q9UJ83 578 aa12.83□□□□□ -0.36
CHMP3-201ENST00000263856 COL2A1P02458 1487 aaPredicted RBP12.83□□□□□ -0.36
CHMP3-201ENST00000263856 TM7SF2O76062 418 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 ABCD1P33897 745 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 TNFAIP1Q13829 316 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 CWF19L1Q69YN2 538 aaKnown RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 XRRA1Q6P2D8 792 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 CMASQ8NFW8 434 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 PCYT2Q99447 389 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 LPIN3Q9BQK8 851 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 CNTN3Q9P232 1028 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 TXNDC16Q9P2K2 825 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 FETUBQ9UGM5 382 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 CPSF3Q9UKF6 684 aaKnown RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 TSPAN16Q9UKR8 245 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 APOBEC2Q9Y235 224 aaKnown RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 ARID2Q68CP9 1835 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 A8MXQ7 604 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 PIGRP01833 764 aa12.82□□□□□ -0.36
CHMP3-201ENST00000263856 TFE3P19532 575 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-201ENST00000263856 MSX2P35548 267 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms