RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 PTP4A2Q12974 167 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 ARID5BQ14865 1188 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 FAM102AQ5T9C2 384 aaPredicted RBP19.19■□□□□ 0.66
SDF4-201ENST00000263741 MON1BQ7L1V2 547 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 ADAM32Q8TC27 787 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 SH3RF2Q8TEC5 729 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 KCNF1Q9H3M0 494 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 SFMBT1Q9UHJ3 866 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 MIA3Q5JRA6 1907 aa19.19■□□□□ 0.66
SDF4-201ENST00000263741 A0A087X0T9 212 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 DPYSL4O14531 572 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ATMINO43313 823 aaPredicted RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 HMBSP08397 361 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 FAM228BP0C875 321 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 CDC25BP30305 580 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ATP5C1P36542 298 aaKnown RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 GABRB2P47870 512 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 RNASE9P60153 205 aaKnown RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 PITX1P78337 314 aaPredicted RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 SYPL2Q5VXT5 272 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ELSPBP1Q96BH3 223 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 TRPV4Q9HBA0 871 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ADAM22Q9P0K1 906 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ARHGAP26Q9UNA1 814 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 LEFTY2O00292 366 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 NCAM1P13591 858 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 SLC7A9P82251 487 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 SLC6A3Q01959 620 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 ACAD10Q6JQN1 1059 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 PHF13Q86YI8 300 aaPredicted RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 SLC44A3Q8N4M1 653 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 GOLGA1Q92805 767 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 METTL5Q9NRN9 209 aaKnown RBP19.18■□□□□ 0.66
SDF4-201ENST00000263741 ABCC13Q9NSE7 274 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 CFAP97Q9P2B7 532 aa19.18■□□□□ 0.66
SDF4-201ENST00000263741 CUL9Q8IWT3 2517 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 ECI2O75521 394 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 GFPT1Q06210 699 aaPredicted RBP19.17■□□□□ 0.66
SDF4-201ENST00000263741 USP4Q13107 963 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 ZNF77Q15935 545 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 TOGARAM2Q6ZUX3 1019 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 CELF5Q8N6W0 485 aaKnown RBP19.17■□□□□ 0.66
SDF4-201ENST00000263741 MSANTD4Q8NCY6 345 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 RNF139Q8WU17 664 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 ASIC4Q96FT7 647 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 ZNHIT6Q9NWK9 470 aaKnown RBP19.17■□□□□ 0.66
SDF4-201ENST00000263741 MARCH2Q9P0N8 246 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 IGSF9Q9P2J2 1179 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 ZMYM5Q9UJ78 669 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 DNMT3LQ9UJW3 386 aa19.17■□□□□ 0.66
SDF4-201ENST00000263741 BZW2Q9Y6E2 419 aaKnown RBP19.17■□□□□ 0.66
SDF4-201ENST00000263741 SART1O43290 800 aaKnown RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 YWHAZP63104 245 aaKnown RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 TSR1Q2NL82 804 aaKnown RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 DEFB106AQ8N104 65 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 BPIFB1Q8TDL5 484 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 PYCARDQ9ULZ3 195 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 SOBPA7XYQ1 873 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 CAPN9O14815 690 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 MTF1Q14872 753 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 DCAF6Q58WW2 860 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 TRIM68Q6AZZ1 485 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 TRNP1Q6NT89 227 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 SLC26A9Q7LBE3 791 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 C17orf53Q8N3J3 647 aaPredicted RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 EMC1Q8N766 993 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 DQX1Q8TE96 717 aaKnown RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 KLF16Q9BXK1 252 aaPredicted RBP19.16■□□□□ 0.66
SDF4-201ENST00000263741 POPDC2Q9HBU9 364 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 WNT6Q9Y6F9 365 aa19.16■□□□□ 0.66
SDF4-201ENST00000263741 SLC12A8A0AV02 714 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 HSF2BPO75031 334 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 FTLP02792 175 aaPredicted RBP19.15■□□□□ 0.66
SDF4-201ENST00000263741 PFKLP17858 780 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 PSMC3P17980 439 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 RRM1P23921 792 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 WEE1P30291 646 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 GDI1P31150 447 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 SNX16P57768 344 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 TDGQ13569 410 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 ZNF268Q14587 947 aaPredicted RBP19.15■□□□□ 0.66
SDF4-201ENST00000263741 EFHC1Q5JVL4 640 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 TAC4Q86UU9 113 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 MCOLN2Q8IZK6 566 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 COL25A1Q9BXS0 654 aaPredicted RBP19.15■□□□□ 0.66
SDF4-201ENST00000263741 SYNJ2BP-COX16A0A087WUM0 186 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 TFE3P19532 575 aaPredicted RBP19.15■□□□□ 0.66
SDF4-201ENST00000263741 FLT3P36888 993 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 GPC5P78333 572 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 IER5LQ5T953 404 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 KLHDC10Q6PID8 442 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 VPS36Q86VN1 386 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 MFSD6LQ8IWD5 586 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 JOSD2Q8TAC2 188 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 ADAM33Q9BZ11 813 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 DEF6Q9H4E7 631 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 KIF9Q9HAQ2 790 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 COX16Q9P0S2 106 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 SORCS3Q9UPU3 1222 aa19.15■□□□□ 0.66
SDF4-201ENST00000263741 DAB1O75553 588 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms