RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ASB14A6NK59 587 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 GPC4O75487 556 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 MOCS2O96007 188 aaPredicted RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 GMPRP36959 345 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 CACNA2D1P54289 1103 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 TRMT10BQ6PF06 316 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 TNS4Q8IZW8 715 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 FAM136AQ96C01 138 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 TWNKQ96RR1 684 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 LSM8O95777 96 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 GRIA1P42261 906 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 WLSQ5T9L3 541 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 RINLQ6ZS11 566 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 FAM183BPQ6ZVS7 135 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 IGDCC3Q8IVU1 814 aa16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 CADM1Q9BY67 442 aaKnown RBP16.75■□□□□ 0.27
PDZRN3-201ENST00000263666 ITGAVP06756 1048 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 ERVK-10P10266 1014 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 AKAP5P24588 427 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 MGAT1P26572 445 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 KLRC2P26717 231 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 CASP2P42575 452 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 MRPS35P82673 323 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 RBP5P82980 135 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 BBS12Q6ZW61 710 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 RNPEPQ9H4A4 650 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC39A10Q9ULF5 831 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 GOLGA4Q13439 2230 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 SIGLEC16A6NMB1 481 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 PRR5-ARHGAP8B1AHC4 643 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC25A27O95847 323 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 MYL3P08590 195 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 ARHGAP8P85298 464 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 CYTH1Q15438 398 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 LGMNQ99538 433 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 TSR3Q9UJK0 312 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 GRID1Q9ULK0 1009 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 TM9SF1O15321 606 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 DCXO43602 365 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 PSMG1O95456 288 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 PROCP04070 461 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 GSTA2P09210 222 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 INSRRP14616 1297 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 ETS2P15036 469 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 ACO1P21399 889 aaKnown RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 GBE1Q04446 702 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 VWA5B1Q5TIE3 1220 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 USP13Q92995 863 aaPredicted RBP16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 LRMDAQ9H2I8 198 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
PDZRN3-201ENST00000263666 CYP2C8P10632 490 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 EIF4BP23588 611 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 CGB2Q6NT52 195 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 LRGUKQ96M69 825 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 PARK7Q99497 189 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 XAB2Q9HCS7 855 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 LGALS13Q9UHV8 139 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 CLUHO75153 1309 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 DYNC1LI2O43237 492 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 ABHD2P08910 425 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 C6orf222P0C671 652 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 CCDC130P13994 396 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 RABGGTBP53611 331 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 RIPK1Q13546 671 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 PDCD2Q16342 344 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 PAN2Q504Q3 1202 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 DEFB107AQ8IZN7 70 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 MARK4Q96L34 752 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 SPATC1LQ9H0A9 340 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 CDT1Q9H211 546 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 AP4E1Q9UPM8 1137 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 PAPPAQ13219 1627 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 C2CD2LO14523 706 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 GSC2O15499 205 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 SLC34A1Q06495 639 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 TMCO4Q5TGY1 634 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 GSTCDQ8NEC7 633 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 SNRNP25Q9BV90 132 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 HAPLN2Q9GZV7 340 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 ST6GALNAC4Q9H4F1 302 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 PIN4Q9Y237 131 aaKnown RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 ACTL7BQ9Y614 415 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 AK5Q9Y6K8 562 aa16.73■□□□□ 0.27
PDZRN3-201ENST00000263666 TBC1D12O60347 775 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 PEX11AO75192 247 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ATP4AP20648 1035 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 CMC1Q7Z7K0 106 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 KIAA0319LQ8IZA0 1049 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 C10orf82Q8WW14 230 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 PGLYRP2Q96PD5 576 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 ACO2Q99798 780 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 TASP1Q9H6P5 420 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 BFARQ9NZS9 450 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 DRG1Q9Y295 367 aaKnown RBP16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 SPDYE5A6NIY4 337 aa16.72■□□□□ 0.27
PDZRN3-201ENST00000263666 CXorf49A8MYA2 514 aaPredicted RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms