RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 USP28Q96RU2 1077 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 SMOQ99835 787 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 SLC6A17Q9H1V8 727 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 ZSCAN16Q9H4T2 348 aaPredicted RBP9.45□□□□□ -0.9
LCN1-201ENST00000263598 PRDM16Q9HAZ2 1276 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 CSNK1G1Q9HCP0 422 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 CYLDQ9NQC7 956 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 SCML2Q9UQR0 700 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 NFE2L3Q9Y4A8 694 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 GPSM3Q9Y4H4 160 aa9.45□□□□□ -0.9
LCN1-201ENST00000263598 PCDH15Q96QU1 1955 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 ASCC3Q8N3C0 2202 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 WASH3PC4AMC7 463 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 NPC1O15118 1278 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 SYNCRIPO60506 623 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 BEST1O76090 585 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 CER1O95813 267 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 TBX18O95935 607 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 CISD3P0C7P0 127 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 FAM200BP0CF97 657 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 NCAM1P13591 858 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 CCDC130P13994 396 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 OXTRP30559 389 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 PLA2G4AP47712 749 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 CASP4P49662 377 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 PGFP49763 221 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 NDST1P52848 882 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 E2F4Q16254 413 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 KNOP1Q1ED39 458 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 SGSM1Q2NKQ1 1148 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 FUT11Q495W5 492 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 C19orf48Q6RUI8 117 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 IL27RAQ6UWB1 636 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 UNC13DQ70J99 1090 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 GLRX5Q86SX6 157 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 UNC93AQ86WB7 457 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 CRYBG2Q8N1P7 616 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 PNPLA1Q8N8W4 532 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 ZMIZ2Q8NF64 920 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 GOLGA5Q8TBA6 731 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 SETD7Q8WTS6 366 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 UCMAQ8WVF2 138 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 DNASE2BQ8WZ79 361 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 BHMTQ93088 406 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 TOE1Q96GM8 510 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 C7orf25Q9BPX7 421 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 GZF1Q9H116 711 aaPredicted RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 SDCBP2Q9H190 292 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 MIR1-1HGQ9H1L0 117 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 MAGEF1Q9HAY2 307 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 CD93Q9NPY3 652 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 ITM2CQ9NQX7 267 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 USP36Q9P275 1121 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 TFIP11Q9UBB9 837 aaKnown RBP9.44□□□□□ -0.9
LCN1-201ENST00000263598 DNMT3LQ9UJW3 386 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 PCOLCE2Q9UKZ9 415 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 ZNF510Q9Y2H8 683 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 PCDHA5Q9Y5H7 936 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 STON1Q9Y6Q2 735 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 IGF2RP11717 2491 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 BAHCC1Q9P281 2608 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 AKAP13Q12802 2813 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 DMXL2Q8TDJ6 3036 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 FREM2Q5SZK8 3169 aa9.44□□□□□ -0.9
LCN1-201ENST00000263598 ATRXP46100 2492 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 LRRIQ3A6PVS8 624 aaPredicted RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 SPTLC2O15270 562 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 CYP26A1O43174 497 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 STX6O43752 255 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 CBFA2T3O75081 653 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 PPP6R2O75170 966 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 C4BPAP04003 597 aaKnown RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 RPN1P04843 607 aaKnown RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 ZNF883P0CG24 379 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 ACADMP11310 421 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 RARGP13631 454 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 ACO1P21399 889 aaKnown RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 CHKAP35790 457 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 MATKP42679 507 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 CLDN10P78369 228 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 ORC1Q13415 861 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 C10orf120Q5SQS8 335 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 ZCCHC9Q8N567 271 aaKnown RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 C12orf29Q8N999 325 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 LINC00301Q8NCQ3 95 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 PARD3BQ8TEW8 1205 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 PRCCQ92733 491 aaPredicted RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 TAF4BQ92750 862 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 CDK5RAP1Q96SZ6 601 aaKnown RBP9.43□□□□□ -0.9
LCN1-201ENST00000263598 CDC6Q99741 560 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 NUP58Q9BVL2 599 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 GPR174Q9BXC1 333 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 DNAI2Q9GZS0 605 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 GAREM1Q9H706 876 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 PNPLA8Q9NP80 782 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 SLC39A2Q9NP94 309 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 TM7SF3Q9NS93 570 aa9.43□□□□□ -0.9
LCN1-201ENST00000263598 FAM49BQ9NUQ9 324 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms