RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 AMPD2Q01433 879 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 AUHQ13825 339 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM83EQ2M2I3 478 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RNF43Q68DV7 783 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PPP1R14BQ96C90 147 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PIH1D1Q9NWS0 290 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TAS2R14Q9NYV8 317 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PNMA8BQ9ULN7 279 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PKP3Q9Y446 797 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ABCA9Q8IUA7 1624 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ZNF263O14978 683 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RPL5P46777 297 aaKnown RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RBP5P82980 135 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TTLL4Q14679 1199 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 GOLGA7BQ2TAP0 167 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 KIAA1841Q6NSI8 718 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPOCD1Q6ZMY3 1216 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PARP8Q8N3A8 854 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 APOL5Q9BWW9 433 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 MTMR12Q9C0I1 747 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 SPRTNQ9H040 489 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 VTA1Q9NP79 307 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ENTPD7Q9NQZ7 604 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 LRRC4BQ9NT99 713 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PCDHGC5Q9Y5F6 944 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PXDNQ92626 1479 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 IDH3BO43837 385 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 PROSCO94903 275 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 MED26O95402 600 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAM86B2P0C5J1 330 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 LLGL2Q6P1M3 1020 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 APOPT1Q96IL0 206 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 C1orf50Q9BV19 199 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 EPS8L2Q9H6S3 715 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHST7Q9NS84 486 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 RIC8BQ9NVN3 520 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 H2AFY2Q9P0M6 372 aaPredicted RBP10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 ITGB1BP2Q9UKP3 347 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 STARD13Q9Y3M8 1113 aa10.03□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRIM43BA6NCK2 446 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 TBKBP1A7MCY6 615 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 CES2O00748 559 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 WNT7AO00755 349 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATP6V1G1O75348 118 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 NDUFS3O75489 264 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 CHRNA5P30532 468 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 ELK3P41970 407 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 HSD17B4P51659 736 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 FOLH1Q04609 750 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 PPATQ06203 517 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 FAAP100Q0VG06 881 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 EML3Q32P44 896 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 GPR107Q5VW38 600 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 TTC39CQ8N584 583 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 ATPAF2Q8N5M1 289 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 ASAP3Q8TDY4 903 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 NT5C1AQ9BXI3 368 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 HDHD2Q9H0R4 259 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 DNAJC18Q9H819 358 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 TRPC7Q9HCX4 862 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 SH3GLB1Q9Y371 365 aa10.02□□□□□ -0.8
CTDSPL2-201ENST00000260327 CLASP2O75122 1294 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 STIP1P31948 543 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SCNN1BP51168 640 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 NET1Q7Z628 596 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 STRA8Q7Z7C7 330 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 DHDDSQ86SQ9 333 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PABPC5Q96DU9 382 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 OTUB1Q96FW1 271 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRIM54Q9BYV2 358 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLCO1B3Q9NPD5 702 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RSL24D1Q9UHA3 163 aaKnown RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 EVPLLA8MZ36 301 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ARIH2O95376 493 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ME2P23368 584 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 NPTX2P47972 431 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 NFIAQ12857 509 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TRAF3Q13114 568 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CBX3Q13185 183 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CLEC16AQ2KHT3 1053 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RORBQ92753 470 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC35C1Q96A29 364 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 FAM95CA0A1B0GW59 222 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 LIN7AO14910 233 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 GJB6O95452 261 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ITGB3P05106 788 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 RPS6KA3P51812 740 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 AMHR2Q16671 573 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CBWD6Q4V339 395 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 SLC45A4Q5BKX6 768 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CBWD3Q5JTY5 395 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 CBWD5Q5RIA9 395 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 PDZK1Q5T2W1 519 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 ATF7IP2Q5U623 682 aa10.02□□□□□ -0.81
CTDSPL2-201ENST00000260327 TTC7BQ86TV6 843 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms