RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ACSF2Q96CM8 615 aaPredicted RBP18.24■□□□□ 0.51
SRSF1-201ENST00000258962 CFAP57Q96MR6 1250 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 HINFPQ9BQA5 517 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 PLEKHA4Q9H4M7 779 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 SLITRK6Q9H5Y7 841 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 ASNSD1Q9NWL6 643 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 STIM2Q9P246 746 aa18.24■□□□□ 0.51
SRSF1-201ENST00000258962 GOLGA6L10A0A0M3HER8 536 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 HHLA1C9JL84 531 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 PI4K2BG5E9Z4 385 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 TGM5O43548 720 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ZRANB2O95218 330 aaKnown RBP eCLIP18.23■□□□□ 0.516e-7■■□□□ 12.2
SRSF1-201ENST00000258962 GLI1P08151 1106 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SPATA31D3P0C874 917 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 MIPP30301 263 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 TMCO3Q6UWJ1 677 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SPATA31D4Q6ZUB0 917 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 GPRIN1Q7Z2K8 1008 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 C12orf76Q8N812 135 aaPredicted RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RUBCNQ92622 972 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SMARCD1Q96GM5 515 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 PEBP4Q96S96 227 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 KCNK16Q96T55 309 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 S1PR5Q9H228 398 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CSNK1G1Q9HCP0 422 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 MAN1C1Q9NR34 630 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ZNF446Q9NWS9 450 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 USP15Q9Y4E8 981 aaPredicted RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CDY1Q9Y6F8 540 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 PHF2O75151 1096 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 OAZ2O95190 189 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RALAP11233 206 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 IL9P15248 144 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 PCK1P35558 622 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SMAD2Q15796 467 aaKnown RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CYP1B1Q16678 543 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CTXN3Q4LDR2 81 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RARS2Q5T160 578 aaKnown RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ZNF280DQ6N043 979 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CYP4V2Q6ZWL3 525 aaPredicted RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ARCQ7LC44 396 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 CCDC50Q8IVM0 306 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RCOR2Q8IZ40 523 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 KREMEN2Q8NCW0 462 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RAPGEF5Q92565 580 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 NDRG1Q92597 394 aaKnown RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 RNF25Q96BH1 459 aaPredicted RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SLITRK1Q96PX8 696 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 OSBPL8Q9BZF1 889 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ADAM7Q9H2U9 754 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 ZWILCHQ9H900 591 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 SFXN1Q9H9B4 322 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
SRSF1-201ENST00000258962 AMACRQ9UHK6 382 aa18.23■□□□□ 0.51
SRSF1-201ENST00000258962 TCF20Q9UGU0 1960 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ZSCAN5CA6NGD5 496 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 C3orf70A6NLC5 250 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 BHMG1C9JSJ3 638 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ATP8B1O43520 1251 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 RNF8O76064 485 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 SEC31AO94979 1220 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 HEXIM1O94992 359 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 TRUB2O95900 331 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 MYBL2P10244 700 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 BDNFP23560 247 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ARPP19P56211 112 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 TSPY1Q01534 308 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 KLF1Q13351 362 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 RAB33AQ14088 237 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 MRPL58Q14197 206 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 HADHQ16836 314 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 SMTNL2Q2TAL5 461 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 RAB41Q5JT25 222 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ATAT1Q5SQI0 421 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 TTC27Q6P3X3 843 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 LILRA6Q6PI73 481 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 MFSD7Q6UXD7 560 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 TMC5Q6UXY8 1006 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 RBM41Q96IZ5 413 aaKnown RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 UHRF1Q96T88 793 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 OXCT2Q9BYC2 517 aaPredicted RBP18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ADAM33Q9BZ11 813 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 UBXN6Q9BZV1 441 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ZCWPW1Q9H0M4 648 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 LRRC4Q9HBW1 653 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 PCSK1NQ9UHG2 260 aa18.22■□□□□ 0.51
SRSF1-201ENST00000258962 ADAM12O43184 909 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 KRT7P08729 469 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 OR4Q2P0C623 313 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 TFE3P19532 575 aaPredicted RBP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 SDC4P31431 198 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 PTPN9P43378 593 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 TKTL1P51854 596 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 ATP11AP98196 1134 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 MAPRE1Q15691 268 aaKnown RBP18.21■□□□□ 0.51
SRSF1-201ENST00000258962 PPP2R5EQ16537 467 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 CDO1Q16878 200 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 EFHC1Q5JVL4 640 aa18.21■□□□□ 0.51
SRSF1-201ENST00000258962 SPOCD1Q6ZMY3 1216 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms