RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 IFNA16P05015 189 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 RRM2P31350 389 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 BTDP43251 543 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 OR3A3P47888 321 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NUP107P57740 925 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 KCNJ10P78508 379 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 FSCBQ5H9T9 825 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 UBE2UQ5VVX9 321 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 SLC6A19Q695T7 634 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 TTC7BQ86TV6 843 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 C2CD5Q86YS7 1000 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 P3H2Q8IVL5 708 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CLIP4Q8N3C7 705 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 MREGQ8N565 214 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ASCC1Q8N9N2 400 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 PLBD2Q8NHP8 589 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 POC1BQ8TC44 478 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 B3GALT6Q96L58 329 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 HINFPQ9BQA5 517 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 FERMT1Q9BQL6 677 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 MENTQ9BUN1 341 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 NYXQ9GZU5 481 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CNOT10Q9H9A5 744 aaKnown RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 RXFP1Q9HBX9 757 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF275Q9NSD4 429 aaPredicted RBP8□□□□□ -1.13
GPNMB-201ENST00000258733 ANKEF1Q9NU02 776 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 STAU2Q9NUL3 570 aaKnown RBP eCLIP8□□□□□ -1.13
GPNMB-201ENST00000258733 ANKMY1Q9P2S6 941 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF212Q9UDV6 495 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 INVSQ9Y283 1065 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 RIPK3Q9Y572 518 aa8□□□□□ -1.13
GPNMB-201ENST00000258733 CLTCQ00610 1675 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 KDM3AQ9Y4C1 1321 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 MYH1P12882 1939 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 A0A1W2PQ72 361 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 APAF1O14727 1248 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 KCNN4O15554 427 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SERPINI2O75830 405 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TFAP2AP05549 437 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 S100A9P06702 114 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ATF3P18847 181 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TNFRSF8P28908 595 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 GDI1P31150 447 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 BFSP1Q12934 665 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TRIM25Q14258 630 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TRIM16LQ309B1 348 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TTC22Q5TAA0 569 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 FOXR2Q6PJQ5 311 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 CNSTQ6PJW8 725 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 LDHAL6AQ6ZMR3 332 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 LIMS2Q7Z4I7 341 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 GALNT4Q8N4A0 578 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SLC2A14Q8TDB8 520 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RELTQ969Z4 430 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 CNPY3Q9BT09 278 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 FSD1Q9BTV5 496 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 GON7Q9BXV9 100 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TRIT1Q9H3H1 467 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 LRRC19Q9H756 370 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 OLFML3Q9NRN5 406 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 POLR3BQ9NW08 1133 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TUBE1Q9UJT0 475 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SNX7Q9UNH6 387 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SAR1BQ9Y6B6 198 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ACOD1A6NK06 481 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 CDH16O75309 829 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SCGB1D2O95969 90 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SERPINB5P36952 375 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TALDO1P37837 337 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 DIO1P49895 249 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RENBPP51606 427 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 DSC1Q08554 894 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TBX2Q13207 712 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 KHDC1Q4VXA5 237 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 IL31Q6EBC2 164 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 NFRKBQ6P4R8 1299 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SETD3Q86TU7 594 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ADCK1Q86TW2 530 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ZNF619Q8N2I2 560 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 CBARPQ8N350 705 aaPredicted RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 OR52N1Q8NH53 320 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RAPGEF4Q8WZA2 1011 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TP53INP1Q96A56 240 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ZUFSPQ96AP4 578 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 TMEM237Q96Q45 408 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 ELAC1Q9H777 363 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 GORASP2Q9H8Y8 452 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RPRD1BQ9NQG5 326 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 DIABLOQ9NR28 239 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 SMARCAL1Q9NZC9 954 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 LIMA1Q9UHB6 759 aaKnown RBP7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RPS6KA6Q9UK32 745 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 RCOR1Q9UKL0 485 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 PCDHGC3Q9UN70 934 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 COG5Q9UP83 839 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 HPSEQ9Y251 543 aa7.99□□□□□ -1.13
GPNMB-201ENST00000258733 USP15Q9Y4E8 981 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms