RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 TAL1P17542 331 aaPredicted RBP19.54■□□□□ 0.72
PTPRE-201ENST00000254667 CYP3A7P24462 503 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 PCBP1Q15365 356 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPRE-201ENST00000254667 STRA8Q7Z7C7 330 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 RRAGCQ9HB90 399 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 RASSF10A6NK89 507 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 TBKBP1A7MCY6 615 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 TM9SF1O15321 606 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 THRAP10827 490 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 TBX4P57082 545 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 MPP3Q13368 585 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 ZFPM1Q8IX07 1006 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 SPASTQ9UBP0 616 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 ATP11BQ9Y2G3 1177 aa19.54■□□□□ 0.72
PTPRE-201ENST00000254667 POMCP01189 267 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 LGALS2P05162 132 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 RAP1GDS1P52306 607 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 NFIL3Q16649 462 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 TMC7Q7Z402 723 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 PRKD2Q9BZL6 878 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 DCLK3Q9C098 648 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 MYO1GB0I1T2 1018 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 ST3GAL1Q11201 340 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 TUBGCP3Q96CW5 907 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 NT5MQ9NPB1 228 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 CSDE1O75534 798 aaKnown RBP19.53■□□□□ 0.72
PTPRE-201ENST00000254667 SH3RF1Q7Z6J0 888 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 HORMAD1Q86X24 394 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 LRRC34Q8IZ02 419 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 SYNDIG1Q9H7V2 258 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 APPL1Q9UKG1 709 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 VANGL2Q9ULK5 521 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 PCDHA3Q9Y5H8 950 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 RAD54BQ9Y620 910 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 SERPINF2P08697 491 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 ADIGQ0VDE8 80 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 CDH17Q12864 832 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 VGLL4Q14135 290 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 CYTH1Q15438 398 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 ACBD5Q5T8D3 534 aaPredicted RBP19.53■□□□□ 0.72
PTPRE-201ENST00000254667 C1orf186Q6ZWK4 172 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 MDM1Q8TC05 714 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 RBM22Q9NW64 420 aaKnown RBP eCLIP19.53■□□□□ 0.72
PTPRE-201ENST00000254667 SOX13Q9UN79 622 aa19.53■□□□□ 0.72
PTPRE-201ENST00000254667 HACD1B0YJ81 288 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 ALDH1A2O94788 518 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 AKAP5P24588 427 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 TRIP10Q15642 601 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 PLEKHA8Q96JA3 519 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 ECSITQ9BQ95 431 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 LOC100653049A0A140TA62 436 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 KRT34O76011 436 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 ALOX15P16050 662 aaPredicted RBP19.52■□□□□ 0.72
PTPRE-201ENST00000254667 UBA1P22314 1058 aaKnown RBP19.52■□□□□ 0.72
PTPRE-201ENST00000254667 SOAT1P35610 550 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 ATN1P54259 1190 aaPredicted RBP19.52■□□□□ 0.72
PTPRE-201ENST00000254667 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
PTPRE-201ENST00000254667 BBS7Q8IWZ6 715 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 RMND5AQ9H871 391 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 SPACA6W5XKT8 324 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 RAMP2O60895 175 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 GHRP10912 638 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 DNAJB2P25686 324 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 CELF3Q5SZQ8 465 aaKnown RBP19.52■□□□□ 0.72
PTPRE-201ENST00000254667 FUT8Q9BYC5 575 aa19.52■□□□□ 0.72
PTPRE-201ENST00000254667 MYPNQ86TC9 1320 aa19.52■□□□□ 0.71
PTPRE-201ENST00000254667 PSMD10O75832 226 aa19.52■□□□□ 0.71
PTPRE-201ENST00000254667 SLC6A3Q01959 620 aa19.52■□□□□ 0.71
PTPRE-201ENST00000254667 UXTQ9UBK9 157 aaPredicted RBP19.52■□□□□ 0.71
PTPRE-201ENST00000254667 SLC22A9Q8IVM8 553 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 WDR18Q9BV38 432 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 NCKIPSDQ9NZQ3 722 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 CBX4O00257 560 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 CAND2O75155 1236 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 SEC24DO94855 1032 aaPredicted RBP19.51■□□□□ 0.71
PTPRE-201ENST00000254667 YWHAQP27348 245 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 WLSQ5T9L3 541 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 IL17RAQ96F46 866 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 NRCAMQ92823 1304 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 FAM237AA0A1B0GTK4 181 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 MPOP05164 745 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 UNC93AQ86WB7 457 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 UBIAD1Q9Y5Z9 338 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.51■□□□□ 0.71
PTPRE-201ENST00000254667 HLA-DPA1P20036 260 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 TUFMP49411 452 aaKnown RBP19.51■□□□□ 0.71
PTPRE-201ENST00000254667 CSE1LP55060 971 aaKnown RBP19.51■□□□□ 0.71
PTPRE-201ENST00000254667 TRAPPC12Q8WVT3 735 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 MTMR8Q96EF0 704 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 ABHD8Q96I13 439 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 EFCAB1Q9HAE3 211 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 HMX1Q9NP08 348 aaPredicted RBP19.51■□□□□ 0.71
PTPRE-201ENST00000254667 CYP39A1Q9NYL5 469 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 L1RE1Q9UN81 338 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 PLA2G4CQ9UP65 541 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 SNCAIPQ9Y6H5 919 aa19.51■□□□□ 0.71
PTPRE-201ENST00000254667 A0A087X0B3 334 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 O00370 1275 aa19.5■□□□□ 0.71
PTPRE-201ENST00000254667 ADCYAP1R1P41586 468 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms