RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 SLC40A1Q9NP59 571 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 RAB6BQ9NRW1 208 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 CACNG4Q9UBN1 327 aa19.45■□□□□ 0.7
PDLIM4-201ENST00000253754 HGSO14964 777 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 KRT4P19013 534 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 PHBP35232 272 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 RDXP35241 583 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 BST2Q10589 180 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC1A5Q15758 541 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 MAP3K21Q5TCX8 1036 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 KLHDC9Q8NEP7 349 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 THOC1Q96FV9 657 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 KLF6Q99612 283 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 ACSS3Q9H6R3 686 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 PRPF4O43172 522 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 GHRP10912 638 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 CA4P22748 312 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 CRYBB1P53674 252 aaPredicted RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 IL9RQ01113 521 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC9A4Q6AI14 798 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 ANKRD52Q8NB46 1076 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 TEKT4Q8WW24 435 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 C12orf65Q9H3J6 166 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 DHX35Q9H5Z1 703 aaKnown RBP19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 IPPQ9Y573 584 aa19.44■□□□□ 0.7
PDLIM4-201ENST00000253754 KBTBD13C9JR72 458 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 GOLGA8RI6L899 631 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 MYCP01106 439 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 GBE1Q04446 702 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 DNAJC3Q13217 504 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 CCSAPQ6IQ19 270 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 CCDC185Q8N715 623 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 CCDC110Q8TBZ0 833 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 C11orf84Q9BUA3 381 aaPredicted RBP19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 PHACTR1Q9C0D0 580 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 SNX25Q9H3E2 840 aa19.43■□□□□ 0.7
PDLIM4-201ENST00000253754 MDM4O15151 490 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 TYROBPO43914 113 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 FKTNO75072 461 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 ZBED1O96006 694 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 CYP2F1P24903 491 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 BCAT1P54687 386 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 PCBP1Q15365 356 aaKnown RBP eCLIP19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 OSTM1Q86WC4 334 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SMG8Q8ND04 991 aaKnown RBP19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 PXYLP1Q8TE99 480 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 STK32AQ8WU08 396 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 DCAKDQ8WVC6 231 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 RMDN2Q96LZ7 410 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 DHRS4Q9BTZ2 278 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC12A4Q9UP95 1085 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 MFHAS1Q9Y4C4 1052 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 NR2E3Q9Y5X4 410 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SUN1O94901 812 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 UBOX5O94941 541 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 GNRH1P01148 92 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 TGM2P21980 687 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 ACAT1P24752 427 aaKnown RBP19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 L1CAMP32004 1257 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC10A2Q12908 348 aaPredicted RBP19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SLC26A9Q7LBE3 791 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 CRYBG2Q8N1P7 616 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 PYROXD2Q8N2H3 581 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 MZB1Q8WU39 189 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 WNT8BQ93098 351 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 ZFP42Q96MM3 310 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 TBCBQ99426 244 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 ZNF670Q9BS34 389 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 NRDE2Q9H7Z3 1164 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 SLCO1B3Q9NPD5 702 aa19.42■□□□□ 0.7
PDLIM4-201ENST00000253754 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 TCRBV9S1A1TA0A576 114 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MEIS3P2A8K0S8 358 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CLDN5O00501 218 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 RASSF9O75901 435 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CD4P01730 458 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 TAF6P49848 677 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MGAT5Q09328 741 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 ADGRD1Q6QNK2 874 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 ADGRF2Q8IZF7 708 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 PCSK9Q8NBP7 692 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 KCTD15Q96SI1 283 aaPredicted RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 BEGAINQ9BUH8 593 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MTMR10Q9NXD2 777 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 SMG5Q9UPR3 1016 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 TEX264Q9Y6I9 313 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 M0QZ92 97 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CTSHP09668 335 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 CST5P28325 142 aaPredicted RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 AXLP30530 894 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MSH2P43246 934 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 PTPN9P43378 593 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 YWHAGP61981 247 aaKnown RBP eCLIP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MRPS6P82932 125 aaKnown RBP19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 SPARCL1Q14515 664 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 MTFR1Q15390 333 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 KLHL38Q2WGJ6 581 aa19.41■□□□□ 0.7
PDLIM4-201ENST00000253754 RNF180Q86T96 592 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms