RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 ALYREFQ86V81 257 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 CTAGE3PQ8IX95 158 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 PPFIBP2Q8ND30 876 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SHKBP1Q8TBC3 707 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 PPP1R13LQ8WUF5 828 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 CFAP36Q96G28 342 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 NAF1Q96HR8 494 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 PGLYRP2Q96PD5 576 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 GBP5Q96PP8 586 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SNRNP25Q9BV90 132 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 NFKBIZQ9BYH8 718 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SHCBP1LQ9BZQ2 653 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 MTMR10Q9NXD2 777 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 WDR35Q9P2L0 1181 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 HEY2Q9UBP5 337 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 HEY1Q9Y5J3 304 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SLC15A5A6NIM6 579 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 PAPSS1O43252 624 aaPredicted RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 RASSF2P50749 326 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ZNF200P98182 395 aaPredicted RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 RINLQ6ZS11 566 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 CHSY1Q86X52 802 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 TTC17Q96AE7 1141 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 C11orf84Q9BUA3 381 aaPredicted RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 TMEM120AQ9BXJ8 343 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 DPEP3Q9H4B8 488 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ARMCX1Q9P291 453 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 PPME1Q9Y570 386 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 IKBKGQ9Y6K9 419 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ARHGAP42A6NI28 874 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 CHADO15335 359 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 TXNP10599 105 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 YWHAGP61981 247 aaKnown RBP eCLIP10.5□□□□□ -0.73
COPB1-201ENST00000249923 FAM187BQ17R55 369 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 TEX44Q53QW1 395 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 MARCH8Q5T0T0 291 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SLC30A9Q6PML9 568 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 TEKT4Q8WW24 435 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 NRG4Q8WWG1 115 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 FAF2Q96CS3 445 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 OXNAD1Q96HP4 312 aaPredicted RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 FAXDC2Q96IV6 333 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 SRPK1Q96SB4 655 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 TSSK1BQ9BXA7 367 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 IQCGQ9H095 443 aaKnown RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 FAM49BQ9NUQ9 324 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 ETNK2Q9NVF9 386 aa10.5□□□□□ -0.73
COPB1-201ENST00000249923 BARX2Q9UMQ3 279 aaPredicted RBP10.5□□□□□ -0.73
COPB1-201ENST00000249923 MYO18AQ92614 2054 aaKnown RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 CCDC195A0A1B0GUA6 201 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TSPAN1O60635 241 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 RNF8O76064 485 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 VDRP11473 427 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 GMPRP36959 345 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 GOLGA7BQ2TAP0 167 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SPDYAQ5MJ70 313 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 OR6B2Q6IFH4 312 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 UNC5AQ6ZN44 842 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TREML1Q86YW5 311 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 ENDOVQ8N8Q3 282 aaKnown RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 FAM172AQ8WUF8 416 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 WDR60Q8WVS4 1066 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 RILPQ96NA2 401 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 RAB3IPQ96QF0 476 aaPredicted RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 NMUR2Q9GZQ4 415 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 PNPLA8Q9NP80 782 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 ASNSD1Q9NWL6 643 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 DICER1Q9UPY3 1922 aaKnown RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 TRIM49D1C9J1S8 452 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 CALB2P22676 271 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 PRKCHP24723 683 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 MAGEA6P43360 314 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SERPINB4P48594 390 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 ACAP1Q15027 740 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 RNF220Q5VTB9 566 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SLC25A41Q8N5S1 370 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 PPP1R14CQ8TAE6 165 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 STK32AQ8WU08 396 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 CCDC124Q96CT7 223 aaKnown RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 SIGLEC10Q96LC7 697 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SLC4A7Q9Y6M7 1214 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SBF1O95248 1867 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 H7C0C1 242 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 MT-ND3P03897 115 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 LGALS2P05162 132 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 APRTP07741 180 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 MCF2P10911 925 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 PTPN4P29074 926 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 STIP1P31948 543 aaKnown RBP10.49□□□□□ -0.73
COPB1-201ENST00000249923 ATP5OP48047 213 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TAPT1Q6NXT6 567 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 C4orf50Q6ZRC1 276 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 ACOT1Q86TX2 421 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 ZNF398Q8TD17 642 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 SLC35F5Q8WV83 523 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 TUBGCP4Q9UGJ1 667 aa10.49□□□□□ -0.73
COPB1-201ENST00000249923 PPP2R3BQ9Y5P8 575 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms