RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 ANXA13P27216 316 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 MAMLD1Q13495 774 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 PPM1LQ5SGD2 360 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 ENOSF1Q7L5Y1 443 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 ZC3H18Q86VM9 953 aaKnown RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 NETO2Q8NC67 525 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 C3orf58Q8NDZ4 430 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 OLIG1Q8TAK6 271 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 THOC1Q96FV9 657 aaKnown RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 PPP1R10Q96QC0 940 aaKnown RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 OSBPL8Q9BZF1 889 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 PTPRHQ9HD43 1115 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 KIAA1671Q9BY89 1806 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 GAS8O95995 478 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 C8AP07357 584 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 KRT3P12035 628 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 CHRNA3P32297 505 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 RFC1P35251 1148 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 NRLP54845 237 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 ADCY2Q08462 1091 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 CTXN3Q4LDR2 81 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 PPP6R3Q5H9R7 873 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 FAM102AQ5T9C2 384 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-201ENST00000238497 CPLX4Q7Z7G2 160 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 IQCKQ8N0W5 287 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 SLC7A14Q8TBB6 771 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 ATP6V1G3Q96LB4 118 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 LRFN3Q9BTN0 628 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 S1PR5Q9H228 398 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 PCDHA3Q9Y5H8 950 aa9.05□□□□□ -0.96
VPS4B-201ENST00000238497 C2CD4DB7Z1M9 353 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 HCRTO43612 131 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 VIMP08670 466 aaKnown RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 ADORA2BP29275 332 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 PEX5P50542 639 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 NOMO3P69849 1222 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 MCL1Q07820 350 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 ZNF844Q08AG5 666 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 UPP1Q16831 310 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 MFSD7Q6UXD7 560 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 TMC3Q7Z5M5 1100 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 ACOT1Q86TX2 421 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 RHOT1Q8IXI2 618 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 BEST2Q8NFU1 509 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 HPDLQ96IR7 371 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 METTL5Q9NRN9 209 aaKnown RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 PARVAQ9NVD7 372 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 GPATCH2LQ9NWQ4 482 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 UBQLN1Q9UMX0 589 aaKnown RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 F5P12259 2224 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 CYP1A2P05177 515 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 LIG3P49916 1009 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 ITGA8P53708 1063 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 IFI35P80217 286 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 IFRD2Q12894 506 aaPredicted RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 VARS2Q5ST30 1063 aaKnown RBP9.04□□□□□ -0.96
VPS4B-201ENST00000238497 CAVIN3Q969G5 261 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 UROC1Q96N76 676 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 PGLYRP2Q96PD5 576 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 TWNKQ96RR1 684 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 TMEM121Q9BTD3 319 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 VPS37BQ9H9H4 285 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 CYP4F11Q9HBI6 524 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 GGT7Q9UJ14 662 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 TMEM59LQ9UK28 342 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 HEY1Q9Y5J3 304 aa9.04□□□□□ -0.96
VPS4B-201ENST00000238497 KIAA0391O15091 583 aaKnown RBP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 ASS1P00966 412 aaKnown RBP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 UNGP13051 313 aaPredicted RBP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 AARSP49588 968 aaKnown RBP eCLIP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 NTHL1P78549 312 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 CREMQ03060 361 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 TMEM132DQ14C87 1099 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 TMEM184AQ6ZMB5 413 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 ANKS3Q6ZW76 656 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 OTOP3Q7RTS5 596 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 GRASPQ7Z6J2 395 aaPredicted RBP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 RFX6Q8HWS3 928 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 ANKMY2Q8IV38 441 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 HOMEZQ8IX15 550 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 RASGEF1CQ8N431 466 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 KCTD6Q8NC69 237 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 PIK3R5Q8WYR1 880 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 SUSD6Q92537 303 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 PBXIP1Q96AQ6 731 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 FAM149B1Q96BN6 582 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 CLSTN3Q9BQT9 956 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 CTNNAL1Q9UBT7 734 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 TECTAO75443 2155 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 ACO1P21399 889 aaKnown RBP9.03□□□□□ -0.96
VPS4B-201ENST00000238497 PROZP22891 400 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 CHKAP35790 457 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 NUMBP49757 651 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 GPS1Q13098 491 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 KCNC3Q14003 757 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 TAF5Q15542 800 aa9.03□□□□□ -0.96
VPS4B-201ENST00000238497 C11orf63Q6NUN7 778 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms