RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GCATO75600 419 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 MT-ND3P03897 115 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 KITP10721 976 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 EPHA3P29320 983 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TTKP33981 857 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 P2RX3P56373 397 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TSPY1Q01534 308 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TEX44Q53QW1 395 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 GJC2Q5T442 439 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 PPP4R4Q6NUP7 873 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 TMEM102Q8N9M5 508 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 ZNF564Q8TBZ8 553 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 GIPC2Q8TF65 315 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 NPLQ9BXD5 320 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 ZNF395Q9H8N7 513 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 ARMC1Q9NVT9 282 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 STK39Q9UEW8 545 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 ANGPTL3Q9Y5C1 460 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 CLUHO75153 1309 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 SFI1A8K8P3 1242 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 GOLGA8MH3BSY2 632 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 M0QX08 132 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 ZC3H11AO75152 810 aaKnown RBP eCLIP13.45□□□□□ -0.26
MSH2-201ENST00000233146 FKBP9O95302 570 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 DDX5P17844 614 aaKnown RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 TGM1P22735 817 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 MRPS22P82650 360 aaKnown RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 C15orf59Q2T9L4 293 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 CEP78Q5JTW2 689 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 GPR107Q5VW38 600 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 ATG16L1Q676U5 607 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 KRT80Q6KB66 452 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 KIF6Q6ZMV9 814 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 CYP4V2Q6ZWL3 525 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 DHRS9Q9BPW9 319 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 MXD3Q9BW11 206 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 SHCBP1LQ9BZQ2 653 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 PCDH12Q9NPG4 1184 aa13.45□□□□□ -0.26
MSH2-201ENST00000233146 MARCOQ9UEW3 520 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 COL1A1P02452 1464 aaPredicted RBP13.45□□□□□ -0.26
MSH2-201ENST00000233146 HOXC11O43248 304 aaPredicted RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 GABBR2O75899 941 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 PCP11498 1178 aaKnown RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 ZNF182P17025 639 aaPredicted RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 GRM5P41594 1212 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 NFATC3Q12968 1075 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 PTK2BQ14289 1009 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CAVIN4Q5BKX8 364 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TAS2R42Q7RTR8 314 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 HEATR3Q7Z4Q2 680 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ACMSDQ8TDX5 336 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TFB1MQ8WVM0 346 aaKnown RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 C12orf10Q9HB07 376 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 SCUBE2Q9NQ36 999 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 PTBP2Q9UKA9 531 aaKnown RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 LRP5O75197 1615 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CYP2D7A0A087X1C5 515 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 SLC16A3O15427 465 aaKnown RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 NUAK1O60285 661 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 L1CAMP32004 1257 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 HPCAL1P37235 193 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 NR4A2P43354 598 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CASP4P49662 377 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 KLF1Q13351 362 aaPredicted RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 TFDP1Q14186 410 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CALCRLQ16602 461 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 UBE2Q1Q7Z7E8 422 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ZNF354CQ86Y25 554 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CRLF3Q8IUI8 442 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 CLIP4Q8N3C7 705 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TRIB2Q92519 343 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 E2F7Q96AV8 911 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TMEM79Q9BSE2 394 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ANO3Q9BYT9 981 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ACSS3Q9H6R3 686 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 PI4KBQ9UBF8 816 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ZNF652Q9Y2D9 606 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 MYO3BQ8WXR4 1341 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TMPRSS15P98073 1019 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TRAF2Q12933 501 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 INAVAQ3KP66 663 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 MGAT5BQ3V5L5 792 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 PPP6R3Q5H9R7 873 aaPredicted RBP13.44□□□□□ -0.26
MSH2-201ENST00000233146 SLX4IPQ5VYV7 408 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 LDHAL6AQ6ZMR3 332 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 TMEM26Q6ZUK4 368 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 SLC51BQ86UW2 128 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 KIAA2013Q8IYS2 634 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ZNF347Q96SE7 839 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 GDAP2Q9NXN4 497 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 KIF1AQ12756 1690 aa13.44□□□□□ -0.26
MSH2-201ENST00000233146 ROBO3Q96MS0 1386 aa13.43□□□□□ -0.26
MSH2-201ENST00000233146 B4GALT4O60513 344 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms