RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NT5MQ9NPB1 228 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 RAG1P15918 1043 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 TMC2Q8TDI7 906 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CNPY3Q9BT09 278 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 SPATA31A1Q5TZJ5 1347 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 ERI2A8K979 691 aaKnown RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 KBTBD13C9JR72 458 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 FCHO1O14526 889 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 VPS26AO75436 327 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CNTFP26441 200 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CAP2P40123 477 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 ALDH1A3P47895 512 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 POU6F1Q14863 301 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CYP2W1Q8TAV3 490 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 SLITRK1Q96PX8 696 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 PCDH9Q9HC56 1237 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 DNALI1O14645 258 aaPredicted RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 HSMCR30P0CW71 290 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 PECAM1P16284 738 aaPredicted RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 MCL1Q07820 350 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 WASHC5Q12768 1159 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 ABRAQ8N0Z2 381 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CARNMT1Q8N4J0 409 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 PARK7Q99497 189 aaKnown RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 NUDT12Q9BQG2 462 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 RMND5AQ9H871 391 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 KRT87PA6NCN2 255 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 F5H5T6 163 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 BCAT1P54687 386 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 HIST2H2ACQ16777 129 aaPredicted RBP13.76□□□□□ -0.21
NEK4-201ENST00000233027 HIST2H2AA3Q6FI13 130 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 NT5DC3Q86UY8 548 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 TXNRD3Q86VQ6 643 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 DIP2AQ14689 1571 aa13.76□□□□□ -0.21
NEK4-201ENST00000233027 CD163L1Q9NR16 1453 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 FKBP6O75344 327 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 RASSF9O75901 435 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 MGAT1P26572 445 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 RFX3P48380 749 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SLC9A5Q14940 896 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 CREG2Q8IUH2 290 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SH3GL2Q99962 352 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 KCNH4Q9UQ05 1017 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 RRN3P2A6NIE6 340 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 DDX3XO00571 662 aaKnown RBP eCLIP13.75□□□□□ -0.215e-8■■■■□ 20
NEK4-201ENST00000233027 PLA2G6O60733 806 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 ASS1P00966 412 aaKnown RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 CALCAP01258 141 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 TIGD7Q6NT04 549 aaPredicted RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 ACOT9Q9Y305 439 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 UBDO15205 165 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 PCNAP12004 261 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SOX6P35712 828 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 MAPK10P53779 464 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 PTPN11Q06124 597 aaPredicted RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 SLC34A1Q06495 639 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 NT5DC1Q5TFE4 455 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 LPCAT2Q7L5N7 544 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 APLFQ8IW19 511 aaPredicted RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 PIK3R5Q8WYR1 880 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 ROGDIQ9GZN7 287 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 DDX18Q9NVP1 670 aaKnown RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 CACNA2D2Q9NY47 1150 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 C6orf203Q9P0P8 240 aaPredicted RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 DNPEPQ9ULA0 475 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SATB2Q9UPW6 733 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 TSC22D2O75157 780 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 PAX7P23759 505 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 THPOP40225 353 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 ERMARDQ5T6L9 678 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 SNX30Q5VWJ9 437 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 ZSCAN18Q8TBC5 510 aaPredicted RBP13.75□□□□□ -0.21
NEK4-201ENST00000233027 TCF7L2Q9NQB0 619 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 ZNF446Q9NWS9 450 aa13.75□□□□□ -0.21
NEK4-201ENST00000233027 CCL15-CCL14A0A0B4J2E2 113 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 B3GAT3O94766 335 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 FAM86B2P0C5J1 330 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 FAM58BPP0C7Q3 252 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 ALOX15P16050 662 aaPredicted RBP13.74□□□□□ -0.21
NEK4-201ENST00000233027 CPT1AP50416 773 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 ALDH5A1P51649 535 aaPredicted RBP13.74□□□□□ -0.21
NEK4-201ENST00000233027 NUP107P57740 925 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 ATP1A4Q13733 1029 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 NFIL3Q16649 462 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 CCL15Q16663 113 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 WASHC2DQ5SRD0 308 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 ATXN2LQ8WWM7 1075 aaKnown RBP13.74□□□□□ -0.21
NEK4-201ENST00000233027 FIG4Q92562 907 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 APOPT1Q96IL0 206 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 INTS13Q9NVM9 706 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 ITSN1Q15811 1721 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 MICAL2O94851 1124 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 LSM8O95777 96 aaKnown RBP13.74□□□□□ -0.21
NEK4-201ENST00000233027 SHBGP04278 402 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 EFEMP1Q12805 493 aa13.74□□□□□ -0.21
NEK4-201ENST00000233027 TRMT5Q32P41 509 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms