RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 FAM228BP0C875 321 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 GSE1Q14687 1217 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 MCOLN2Q8IZK6 566 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 EDEM1Q92611 657 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 SMG9Q9H0W8 520 aaKnown RBP24.72■■□□□ 1.55
HOMER3-201ENST00000221222 ISCUQ9H1K1 167 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 KIF9Q9HAQ2 790 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 POPDC2Q9HBU9 364 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 WDR35Q9P2L0 1181 aa24.72■■□□□ 1.55
HOMER3-201ENST00000221222 TBX18O95935 607 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 MBL2P11226 248 aaPredicted RBP24.71■■□□□ 1.55
HOMER3-201ENST00000221222 TCF3P15923 654 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 FECHP22830 423 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 TAF5Q15542 800 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 C10orf120Q5SQS8 335 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 TANGO2Q6ICL3 276 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 MSANTD2Q6P1R3 559 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 CELF5Q8N6W0 485 aaKnown RBP24.71■■□□□ 1.55
HOMER3-201ENST00000221222 RNF139Q8WU17 664 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 ZFRQ96KR1 1074 aaKnown RBP24.71■■□□□ 1.55
HOMER3-201ENST00000221222 SLC2A13Q96QE2 648 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 NACA2Q9H009 215 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 KCNK12Q9HB15 430 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 DNMT3LQ9UJW3 386 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 NUDT5Q9UKK9 219 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 NENFQ9UMX5 172 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 CCL26Q9Y258 94 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 NUMBLQ9Y6R0 609 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 KIF26AQ9ULI4 1882 aaPredicted RBP24.71■■□□□ 1.55
HOMER3-201ENST00000221222 MYO10Q9HD67 2058 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 ZNF318Q5VUA4 2279 aa24.71■■□□□ 1.55
HOMER3-201ENST00000221222 TMCO5BA8MYB1 307 aa24.7■■□□□ 1.55
HOMER3-201ENST00000221222 FTLP02792 175 aaPredicted RBP24.7■■□□□ 1.55
HOMER3-201ENST00000221222 VIPR2P41587 438 aa24.7■■□□□ 1.55
HOMER3-201ENST00000221222 SLC18A3Q16572 532 aa24.7■■□□□ 1.55
HOMER3-201ENST00000221222 FAM102AQ5T9C2 384 aaPredicted RBP24.7■■□□□ 1.55
HOMER3-201ENST00000221222 RSRC2Q7L4I2 434 aaKnown RBP24.7■■□□□ 1.55
HOMER3-201ENST00000221222 RSPRY1Q96DX4 576 aa24.7■■□□□ 1.55
HOMER3-201ENST00000221222 NHEJ1Q9H9Q4 299 aaPredicted RBP24.7■■□□□ 1.55
HOMER3-201ENST00000221222 CPQQ9Y646 472 aa24.7■■□□□ 1.55
HOMER3-201ENST00000221222 GOLGA6L6A8MZA4 724 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 ZXDAP98168 799 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 ZXDBP98169 803 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 ALKBH5Q6P6C2 394 aaKnown RBP24.69■■□□□ 1.54
HOMER3-201ENST00000221222 ARCQ7LC44 396 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 CCDC42Q96M95 316 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 DEF6Q9H4E7 631 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 TMEM59LQ9UK28 342 aa24.69■■□□□ 1.54
HOMER3-201ENST00000221222 TCRBV5S1A1TA0A578 114 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 TMEM221A6NGB7 291 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 HEPACAM2A8MVW5 462 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 M0R296 226 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 DPYSL4O14531 572 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 MDM4O15151 490 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 DAB1O75553 588 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 NCAM1P13591 858 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 EFEMP1Q12805 493 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 USP4Q13107 963 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 ZNF77Q15935 545 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 SYPL2Q5VXT5 272 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 VITQ6UXI7 678 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 TRIM67Q6ZTA4 783 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 C3orf20Q8ND61 904 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 ST13P5Q8NFI4 369 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-201ENST00000221222 RSAD2Q8WXG1 361 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 KXD1Q9BQD3 176 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 RPP25Q9BUL9 199 aaKnown RBP24.68■■□□□ 1.54
HOMER3-201ENST00000221222 KLF16Q9BXK1 252 aaPredicted RBP24.68■■□□□ 1.54
HOMER3-201ENST00000221222 NAALADL1Q9UQQ1 740 aa24.68■■□□□ 1.54
HOMER3-201ENST00000221222 GOLGA8SH3BPF8 625 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 CAPN9O14815 690 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 AKR1B10O60218 316 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 GRAP2O75791 330 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 HOXD11P31277 338 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-201ENST00000221222 GSDMDP57764 484 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 GFPT1Q06210 699 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-201ENST00000221222 DDX42Q86XP3 938 aaKnown RBP eCLIP24.67■■□□□ 1.54
HOMER3-201ENST00000221222 MFSD6LQ8IWD5 586 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 DEFB106AQ8N104 65 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 SH3RF2Q8TEC5 729 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 DEPDC1BQ8WUY9 529 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 TRIM11Q96F44 468 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 LRRC3BQ96PB8 259 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 PLA2G2FQ9BZM2 168 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 SMOC2Q9H3U7 446 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 SMPD4Q9NXE4 827 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 MARCH2Q9P0N8 246 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 RASAL2Q9UJF2 1139 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 LEFTY2O00292 366 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 ASGR2P07307 311 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 MYBL1P10243 752 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 RRM1P23921 792 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 FCHO2Q0JRZ9 810 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 CCDC122Q5T0U0 273 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 DNAAF5Q86Y56 855 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 SLC44A3Q8N4M1 653 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 KIAA1958Q8N8K9 716 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 RIN3Q8TB24 985 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 BPIFB1Q8TDL5 484 aa24.67■■□□□ 1.54
HOMER3-201ENST00000221222 DQX1Q8TE96 717 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms