RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 RAB44Q7Z6P3 723 aaPredicted RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CARD9Q9H257 536 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 FAM96AQ9H5X1 160 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CATSPERBQ9H7T0 1116 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 BFARQ9NZS9 450 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MID2Q9UJV3 735 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 DERAQ9Y315 318 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 WDR91A4D1P6 747 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 RNF225M0QZC1 329 aaPredicted RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 SCAMP3O14828 347 aaKnown RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 SPATA31D3P0C874 917 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 WEE1P30291 646 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 PRKCIP41743 596 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ARL4CP56559 192 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 GUCY1A3Q02108 690 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CDH18Q13634 790 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 SPATA31D4Q6ZUB0 917 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CRLF3Q8IUI8 442 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CCT8L2Q96SF2 557 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ZSWIM1Q9BR11 485 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 RAB6BQ9NRW1 208 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CDY1Q9Y6F8 540 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 COL4A1P02462 1669 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 A0A0G2JND7 137 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 LTFP02788 710 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 EEF1B2P24534 225 aaKnown RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 OCA2Q04671 838 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 PLD1Q13393 1074 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 CUL3Q13618 768 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MEA1Q16626 185 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ITPRIPL1Q6GPH6 555 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 FAM47EQ6ZV65 393 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ECHDC2Q86YB7 292 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 NPAS4Q8IUM7 802 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 GPR152Q8TDT2 470 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MYLPFQ96A32 169 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 DACT3Q96B18 629 aaPredicted RBP9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ARHGEF26Q96DR7 871 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 TMEM161AQ9NX61 479 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 ORC6Q9Y5N6 252 aa9.75□□□□□ -0.85
CCDC113-201ENST00000219299 MYO5AQ9Y4I1 1855 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SBF2Q86WG5 1849 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 RASA4BC9J798 803 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 H0Y626 953 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 RASA4O43374 803 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 BYSLQ13895 437 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 DDR2Q16832 855 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 PPP1R26Q5T8A7 1209 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 RAPH1Q70E73 1250 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 DDX53Q86TM3 631 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 DDI1Q8WTU0 396 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 VCPIP1Q96JH7 1222 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 UPF3AQ9H1J1 476 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SMYD2Q9NRG4 433 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 NDE1Q9NXR1 346 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 AP4E1Q9UPM8 1137 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 HNRNPCL1O60812 293 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 EOMESO95936 686 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 PCYT1AP49585 367 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 C1QTNF8P60827 252 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ST8SIA6P61647 398 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 DUSP4Q13115 394 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 C16orf87Q6PH81 154 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ANKRD52Q8NB46 1076 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ASIC4Q96FT7 647 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SNX27Q96L92 541 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 TTC25Q96NG3 672 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 LRRC1Q9BTT6 524 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 PPARGC1AQ9UBK2 798 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ADAM28Q9UKQ2 775 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 A0A0U1RQF3 1178 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 HNRNPCP07910 306 aaKnown RBP eCLIP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 HNRNPH1P31943 449 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ETFBP38117 255 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SESN2P58004 480 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SLC6A3Q01959 620 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 C1orf146Q5VVC0 180 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 LRIG3Q6UXM1 1119 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 WDR75Q8IWA0 830 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 HNRNPLLQ8WVV9 542 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 APOL5Q9BWW9 433 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 FBXL5Q9UKA1 691 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 GNEQ9Y223 722 aaKnown RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 TAF1LQ8IZX4 1826 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 F5H5T6 163 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ADH1AP07327 375 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 NCF2P19878 526 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 CCR1P32246 355 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 ZNF177Q13360 481 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 TSTA3Q13630 321 aaPredicted RBP9.74□□□□□ -0.85
CCDC113-201ENST00000219299 IZUMO3Q5VZ72 239 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 PLPP4Q5VZY2 271 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SERINC5Q86VE9 423 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 TOP6BLQ8N6T0 577 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 OR6P1Q8NGX9 317 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 GJD2Q9UKL4 321 aa9.74□□□□□ -0.85
CCDC113-201ENST00000219299 SDK1Q7Z5N4 2213 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms