RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PRR5-ARHGAP8B1AHC4 643 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 YWHAZP63104 245 aaKnown RBP15.64■□□□□ 0.09
EFNB1-201ENST00000204961 ARHGAP8P85298 464 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 TMEM132DQ14C87 1099 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 SLC10A6Q3KNW5 377 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 IER5Q5VY09 327 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 AP1ARQ63HQ0 302 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 KCNT2Q6UVM3 1135 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 NLGN2Q8NFZ4 835 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 CCHCR1Q8TD31 782 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 USP33Q8TEY7 942 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 PYDC1Q8WXC3 89 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 GRAMD1AQ96CP6 724 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 PRRC2BQ5JSZ5 2229 aaKnown RBP15.64■□□□□ 0.09
EFNB1-201ENST00000204961 C10orf71Q711Q0 1435 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 MKI67P46013 3256 aaKnown RBP15.64■□□□□ 0.09
EFNB1-201ENST00000204961 APOC4-APOC2K7ER74 178 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 MED7O43513 233 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 APOC2P02655 101 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 ERVK-10P10266 1014 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 LMO2P25791 158 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 PTPN4P29074 926 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 ZNF132P52740 706 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 PAN2Q504Q3 1202 aaKnown RBP15.64■□□□□ 0.09
EFNB1-201ENST00000204961 METTL7BQ6UX53 244 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 DNAJC9Q8WXX5 260 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 NSL1Q96IY1 281 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 GPR20Q99678 358 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 TUBGCP4Q9UGJ1 667 aa15.64■□□□□ 0.09
EFNB1-201ENST00000204961 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 APOL1O14791 398 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ITM2AO43736 263 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ZWINTO95229 277 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 GOT1P17174 413 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 GPD2P43304 727 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 R3HDM1Q15032 1099 aaKnown RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ADGRD1Q6QNK2 874 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 POTEAQ6S8J7 498 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 RNF169Q8NCN4 708 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 E2F7Q96AV8 911 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 CAB39LQ9H9S4 337 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 DPP3Q9NY33 737 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 DRG1Q9Y295 367 aaKnown RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 A6NJR5 290 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 TBX10O75333 385 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ADCYAP1R1P41586 468 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 EFNA5P52803 228 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 IRX1P78414 480 aaPredicted RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ARMC3Q5W041 872 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 SCG3Q8WXD2 468 aaKnown RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 OXNAD1Q96HP4 312 aaPredicted RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 LRMDAQ9H2I8 198 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 SETD4Q9NVD3 440 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 NMRK1Q9NWW6 199 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 SNX10Q9Y5X0 201 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 PSAT1Q9Y617 370 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ACKR2O00590 384 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 GSC2O15499 205 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 DNAJC6O75061 913 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 CALRP27797 417 aaKnown RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 GLRBP48167 497 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 SLC10A2Q12908 348 aaPredicted RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 DLG2Q15700 870 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 TCHHL1Q5QJ38 904 aaPredicted RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 PRAMEF19Q5SWL8 479 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 C1orf146Q5VVC0 180 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 CCDC185Q8N715 623 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 ZBED3Q96IU2 234 aaPredicted RBP15.63■□□□□ 0.09
EFNB1-201ENST00000204961 SLC24A2Q9UI40 661 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
EFNB1-201ENST00000204961 POLR2AP24928 1970 aaKnown RBP15.62■□□□□ 0.09
EFNB1-201ENST00000204961 PRPF4O43172 522 aaKnown RBP eCLIP15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CCNB1P14635 433 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CD1EP15812 388 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CYP2F1P24903 491 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CLDN10P78369 228 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CCDC14Q49A88 953 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 DCAF6Q58WW2 860 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 RALGPS1Q5JS13 557 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 PPP1R15BQ5SWA1 713 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 UNC5AQ6ZN44 842 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 MAB21L3Q8N8X9 362 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 SMC1BQ8NDV3 1235 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CAMKK2Q96RR4 588 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 OSMRQ99650 979 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 HESX1Q9UBX0 185 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 TCRBV5S1A1TA0A578 114 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 CFLARO15519 480 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 USP2O75604 605 aaPredicted RBP15.62■□□□□ 0.09
EFNB1-201ENST00000204961 SMNDC1O75940 238 aaKnown RBP eCLIP15.62■□□□□ 0.09
EFNB1-201ENST00000204961 KRT37O76014 449 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 C6orf222P0C671 652 aaPredicted RBP15.62■□□□□ 0.09
EFNB1-201ENST00000204961 MGAT1P26572 445 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 NEK3P51956 506 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 USP4Q13107 963 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 MARK4Q96L34 752 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 RNF157Q96PX1 679 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 RSAD1Q9HA92 442 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 PNPOQ9NVS9 261 aa15.62■□□□□ 0.09
EFNB1-201ENST00000204961 NVLO15381 856 aaKnown RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms