RNA–Protein interactions for RNA: ENST00000194152.3

PCDHB4-201, Transcript of protocadherin beta 4, humanhuman

APPRIS P1 BASIC

Gene PCDHB4, Length 3,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-201ENST00000194152 SEPT6Q14141 434 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 ZNF484Q5JVG2 852 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 WSCD1Q658N2 575 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 FAM183BPQ6ZVS7 135 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 USP50Q70EL3 339 aaPredicted RBP13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 CCDC125Q86Z20 511 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 C12orf56Q8IXR9 622 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 ABI1Q8IZP0 508 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 FAM136AQ96C01 138 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 SLCO1B3Q9NPD5 702 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 LRCH1Q9Y2L9 728 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 CYB561D2O14569 222 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 MFSD10Q14728 455 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 MROH9Q5TGP6 573 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 SDCBP2Q9H190 292 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 CPSF3Q9UKF6 684 aaKnown RBP13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 STXBP5LQ9Y2K9 1186 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 MAGEA13PA6NCF6 341 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 PAEPP09466 180 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 EIF4BP23588 611 aaKnown RBP13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 THOC5Q13769 683 aaKnown RBP13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 DENND5BQ6ZUT9 1274 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 EXOC3L1Q86VI1 746 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 UNC45BQ8IWX7 931 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 FBXO36Q8NEA4 188 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 ARHGEF3Q9NR81 526 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 NAALADL1Q9UQQ1 740 aa13.39□□□□□ -0.27
PCDHB4-201ENST00000194152 MEIS3P2A8K0S8 358 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ZC3H11AO75152 810 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 HOXC6P09630 235 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 MMP8P22894 467 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 SCNN1GP51170 649 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 HEATR6Q6AI08 1181 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 NXNQ6DKJ4 435 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 IRGCQ6NXR0 463 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PCGF5Q86SE9 256 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ZC3H3Q8IXZ2 948 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ST13P4Q8IZP2 240 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PDZD7Q9H5P4 517 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 DENND2DQ9H6A0 471 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 DCLRE1BQ9H816 532 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 NINJ2Q9NZG7 142 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PPARGC1AQ9UBK2 798 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 COPEO14579 308 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 UNGP13051 313 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 KRT4P19013 534 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 MAGEA10P43363 369 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ARHGAP1Q07960 439 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PKN2Q16513 984 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PMF1Q6P1K2 205 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 MON1BQ7L1V2 547 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 SLFN11Q7Z7L1 901 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ZNF677Q86XU0 584 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 RAB3IL1Q8TBN0 382 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 MPP4Q96JB8 637 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PAIP2BQ9ULR5 123 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 FAF1Q9UNN5 650 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 THSD7AQ9UPZ6 1657 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 DFFAO00273 331 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PEX11AO75192 247 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 IL18RAPO95256 599 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 RBL1P28749 1068 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 GDF10P55107 478 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 CAV1Q03135 178 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 CENPCQ03188 943 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 KPNB1Q14974 876 aaKnown RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 TAF1BQ53T94 588 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 RSPH3Q86UC2 560 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 PYROXD2Q8N2H3 581 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ATP2A3Q93084 1043 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 SHCBP1LQ9BZQ2 653 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ATXN3LQ9H3M9 355 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ACSS2Q9NR19 701 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ETNK2Q9NVF9 386 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 DDIT4Q9NX09 232 aa13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 ABI2Q9NYB9 513 aaPredicted RBP13.38□□□□□ -0.27
PCDHB4-201ENST00000194152 LAMB1P07942 1786 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 TRPA1O75762 1119 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 C22orf31O95567 290 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 TTC4O95801 387 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 ESRRAP11474 423 aaPredicted RBP13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 IL1R2P27930 398 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 SNX16P57768 344 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 STAT4Q14765 748 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 KHDC1Q4VXA5 237 aaKnown RBP13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 ZNF572Q7Z3I7 529 aaPredicted RBP13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 PIP4K2CQ8TBX8 421 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 DDX1Q92499 740 aaKnown RBP13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 USP6NLQ92738 828 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 PGBD4Q96DM1 585 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 MAML3Q96JK9 1138 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 VPS11Q9H270 941 aa13.37□□□□□ -0.27
PCDHB4-201ENST00000194152 TMEM134Q9H6X4 195 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms