RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SPTLC1O15269 473 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 CPA2P48052 419 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 ZBTB16Q05516 673 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 TAZQ16635 292 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 IFNLR1Q8IU57 520 aaPredicted RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 PYROXD2Q8N2H3 581 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 PQLC3Q8N755 202 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 TTC17Q96AE7 1141 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 LRMDAQ9H2I8 198 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 VRTNQ9H8Y1 702 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 DCTN3O75935 186 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 SMIM10L2AP0DMW4 78 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 SMIM10L2BP0DMW5 78 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 CALB2P22676 271 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 ACAT1P24752 427 aaKnown RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 NOMO1Q15155 1222 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 MDH1BQ5I0G3 518 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 SLC27A1Q6PCB7 646 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 CEP128Q6ZU80 1094 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 PRPF39Q86UA1 669 aaKnown RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 AGGF1Q8N302 714 aaeCLIP13.64□□□□□ -0.23
CTNS-201ENST00000046640 ZC3H15Q8WU90 426 aaKnown RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 PTPRN2Q92932 1015 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 PTPN18Q99952 460 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 GCOM2Q9BZD3 368 aaPredicted RBP13.64□□□□□ -0.23
CTNS-201ENST00000046640 ADAMTS10Q9H324 1103 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 PCDH18Q9HCL0 1135 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 EFR3BQ9Y2G0 817 aa13.64□□□□□ -0.23
CTNS-201ENST00000046640 ZBED1O96006 694 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 TPBGLP0DKB5 382 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 HDAC4P56524 1084 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 GBE1Q04446 702 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 CCDC6Q16204 474 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 STK32AQ8WU08 396 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 CEP41Q9BYV8 373 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 HEY2Q9UBP5 337 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 ACTL7BQ9Y614 415 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 CITO14578 2027 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 APOL1O14791 398 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 TREHO43280 583 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 GPR32O75388 356 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 PHBP35232 272 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 PTDSS1P48651 473 aaKnown RBP13.63□□□□□ -0.23
CTNS-201ENST00000046640 KHDC1Q4VXA5 237 aaKnown RBP13.63□□□□□ -0.23
CTNS-201ENST00000046640 FYB2Q5VWT5 728 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 SLC2A14Q8TDB8 520 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 FAM149B1Q96BN6 582 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 USP29Q9HBJ7 922 aa13.63□□□□□ -0.23
CTNS-201ENST00000046640 TCRBV9S1A1TA0A576 114 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 CLDN5O00501 218 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 STRNO43815 780 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 SMNDC1O75940 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
CTNS-201ENST00000046640 SOX4Q06945 474 aaPredicted RBP13.62□□□□□ -0.23
CTNS-201ENST00000046640 NR1H3Q13133 447 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 EFHC2Q5JST6 749 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 DSTYKQ6XUX3 929 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 FAM131BQ86XD5 332 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 MAP7D3Q8IWC1 876 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 RIBC1Q8N443 379 aaPredicted RBP13.62□□□□□ -0.23
CTNS-201ENST00000046640 SNX27Q96L92 541 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 ABHD16BQ9H3Z7 469 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 ARL8BQ9NVJ2 186 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 ARMCX1Q9P291 453 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 SMG5Q9UPR3 1016 aaKnown RBP13.62□□□□□ -0.23
CTNS-201ENST00000046640 PRPF4O43172 522 aaKnown RBP eCLIP13.62□□□□□ -0.232e-7■■■■□ 23.1
CTNS-201ENST00000046640 TYROBPO43914 113 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 GNL1P36915 607 aaPredicted RBP13.62□□□□□ -0.23
CTNS-201ENST00000046640 GRIA1P42261 906 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 TUBP50607 506 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 CCDC15Q0P6D6 951 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 TFDP2Q14188 446 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 MUM1Q2TAK8 710 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 CCDC185Q8N715 623 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 PPM1NQ8N819 430 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 BEST2Q8NFU1 509 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 MIPEPQ99797 713 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 BATF3Q9NR55 127 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 MAD1L1Q9Y6D9 718 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 IKBKGQ9Y6K9 419 aa13.62□□□□□ -0.23
CTNS-201ENST00000046640 SMIM28A0A1B0GU29 152 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 EME2A4GXA9 379 aaPredicted RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 GNAZP19086 355 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 CYP2F1P24903 491 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 SKIV2L2P42285 1042 aaKnown RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 PITX1P78337 314 aaPredicted RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 FAAP100Q0VG06 881 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 SLC10A2Q12908 348 aaPredicted RBP13.61□□□□□ -0.23
CTNS-201ENST00000046640 CCL14Q16627 93 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 NOTUMQ6P988 496 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 PLEKHH3Q7Z736 793 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 TTC7BQ86TV6 843 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 DCAKDQ8WVC6 231 aa13.61□□□□□ -0.23
CTNS-201ENST00000046640 UPF1Q92900 1129 aaKnown RBP eCLIP13.61□□□□□ -0.239e-11■■■■■ 39.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms