RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Sema4bQ62179 823 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Gpr151Q7TSN6 422 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Ppp2r2cQ8BG02 447 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Pcdhgb1Q91XX8 918 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Ankrd34aB2RW11 495 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Ube3aO08759 870 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Pola2P33611 600 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Sash1P59808 1230 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Hepacam2Q4VAH7 463 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Txndc8Q69AB2 127 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 C1qtnf6Q6IR41 264 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 M1apQ9Z0E1 529 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Bmp15Q9Z0L4 392 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Pck1Q9Z2V4 622 aa31.75■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Igkv10-94A0A075B5L1 115 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Gm8994E9PV04 411 aaKnown RBP31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 C87414E9PWI7 475 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Stmn1P54227 149 aaKnown RBP31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Znf367Q0VDT2 340 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 MlxipQ2VPU4 917 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 PkdccQ5RJI4 492 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Slc6a4Q60857 630 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Trps1Q925H1 1281 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Mta2Q9R190 668 aa31.74■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 AlpiF8VPQ6 554 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Ptpn9O35239 593 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Odr4Q4PJX1 447 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 CptpQ8BS40 216 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Usp3Q91W36 520 aaKnown RBP31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Elmod3Q91YP6 381 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Ubox5Q925F4 539 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Thap12Q9CUX1 758 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 DlstQ9D2G2 454 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Asb3Q9WV72 525 aa31.73■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Gm2030D3Z7C4 212 aa31.72■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Psmb7P70195 277 aa31.72■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Retreg2Q6NS82 541 aa31.72■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Arl8aQ8VEH3 186 aa31.72■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Fam170bE9PXT9 378 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Sdc4O35988 198 aaKnown RBP31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Rab33aP97950 237 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Cacna2d2Q6PHS9 1154 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Tlr11Q6R5P0 926 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Mib1Q80SY4 1006 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Zbtb24Q80X44 710 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Best2Q8BGM5 508 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Vmn1r188Q8K3N2 308 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Wdr98Q8VC42 657 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 MtrexQ9CZU3 1040 aaKnown RBP31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Sh2d4bA6X942 431 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Zfp1P08042 402 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 CremP27699 357 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Defa-rs12P50716 91 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Krt86P97861 486 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Smad2Q62432 467 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Cyp3a13Q64464 503 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Znf821Q6PD05 413 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Atoh8Q99NA2 322 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Htra2Q9JIY5 458 aa31.71■■■□□ 2.67
Ctdnep1-201ENSMUST00000108593 Vsig10l2A0A140LHF2 776 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Speer4f2E9Q366 295 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Cldn2O88552 230 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Apobec1P51908 229 aaKnown RBP31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Trappc9Q3U0M1 1148 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Ceacam5Q3UKK2 947 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Pik3r5Q5SW28 871 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 OgdhQ60597 1023 aaKnown RBP31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Panx2Q6IMP4 677 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 B130006D01RikQ8BRH6 153 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Ccz1Q8C1Y8 480 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Prpf39Q8K2Z2 665 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Acsl3Q9CZW4 720 aaKnown RBP31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Trim44Q9QXA7 346 aa31.7■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Jbts17Q8CE72 3214 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Zfp626A0A0U1RQ84 676 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Tldc2A2ACG1 198 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Cdk4P30285 303 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Sox1P53783 391 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Ybx1P62960 322 aaKnown RBP31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Tmem237Q3V0J1 427 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 TCAIMQ66JZ4 499 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Tmem164Q6PHN7 296 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Q80Y73 168 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Cox18Q8VC74 331 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Sema4fQ9Z123 777 aa31.69■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Myl4P09541 193 aaKnown RBP31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 CenpcP49452 906 aaKnown RBP31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Msi1Q61474 362 aaKnown RBP31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Nlrp10Q8CCN1 673 aa31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Kat14Q8CID0 779 aa31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Ndufb5Q9CQH3 189 aa31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Lrrc17Q9CXD9 443 aa31.68■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 SpaarA0A1B0GSZ0 75 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Zbtb11G5E8B9 1050 aaKnown RBP31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Foxr1Q3UTB7 268 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 March4Q80TE3 409 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Ldlrap1Q8C142 308 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Gpr158Q8C419 1200 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Pcdhb1Q91Y08 818 aa31.67■■■□□ 2.66
Ctdnep1-201ENSMUST00000108593 Smarcd2Q99JR8 531 aaKnown RBP31.67■■■□□ 2.66
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms