RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Ubxn7Q6P5G6 467 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ahcyl1Q80SW1 530 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 HomezQ80W88 542 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Washc5Q8C2E7 1159 aaKnown RBP13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zfp62Q8C827 914 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tp53inp2Q8CFU8 221 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Unc45bQ8CGY6 931 aaKnown RBP13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 AslQ91YI0 464 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 AenQ9CZI9 336 aaKnown RBP13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ddx21Q9JIK5 851 aaKnown RBP13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ggps1Q9WTN0 300 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 TfgQ9Z1A1 397 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pdpk1Q9Z2A0 559 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Vmn2r25W4VSP2 855 aa13.36□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm44503E9PYU5 387 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zbtb11G5E8B9 1050 aaKnown RBP13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Serpinb9O08797 374 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tnk2O54967 1055 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ccr1P51675 355 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Slc38a5Q3U1J0 479 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam91a1Q3UVG3 837 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cyp2c29Q64458 490 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 GapdhsQ64467 440 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zdhhc15Q8BGJ0 337 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fbxw8Q8BIA4 598 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pak5Q8C015 719 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mkl1Q8K4J6 964 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Myoz3Q8R4E4 245 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Asb7Q91ZU0 318 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 SncaipQ99ME3 962 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Nme5Q99MH5 211 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 AadacQ99PG0 398 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 PompQ9CQT5 141 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 4933428M09RikQ9D3X3 192 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam90a1bQ9D4F3 419 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam3aQ9D8T0 230 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Msh5Q9QUM7 833 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Sh3pxd2bA2AAY5 908 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zfp990B1AVN5 605 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 SmgcF6VRN1 385 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Gm379J3QQ19 296 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pold2O35654 469 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fam83hQ148V8 1209 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hace1Q3U0D9 909 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Snx27Q3UHD6 539 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 B3gnt3Q5JCS9 372 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Klra8Q60682 266 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tcaf3Q6QR59 914 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zfp759Q7M6X3 721 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Spata20Q80YT5 790 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tmem74Q8BQU7 305 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Klhl38Q8BSF5 581 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Acvr1cQ8K348 493 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Caap1Q8VDY9 356 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfr809Q8VEX8 328 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 CarfQ8VHI4 689 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 ChiaQ91XA9 473 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Actr3Q99JY9 418 aaKnown RBP13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 StambpQ9CQ26 424 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Abcg8Q9DBM0 673 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Iigp1Q9QZ85 413 aa13.35□□□□□ -0.27
Nup88-203ENSMUST00000108531 Serpina3iD3Z450 408 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 PtproE9Q612 1226 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pde6bP23440 856 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Hsdl2Q2TPA8 490 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Xlr3aQ60595 226 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Itm2aQ61500 263 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Klhl17Q6TDP3 640 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Exd1Q8CDF7 570 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Trim61Q8JZK6 461 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Zdhhc3Q8R173 299 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Slc35f5Q8R314 524 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Evi2bQ8VD58 444 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ascc2Q91WR3 749 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Pdk3Q922H2 415 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Homer3Q99JP6 356 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Polr3hQ9D2C6 204 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Lima1Q9ERG0 753 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Trpv2Q9WTR1 756 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 ClcnkbQ9WUB6 687 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 HnrnpcQ9Z204 313 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Arhgef37A1IGU4 676 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Cyp2a22B2RXZ2 492 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ccdc175E9PVB3 822 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Mroh4G3X8W1 983 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Kng1O08677 661 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Olfm1O88998 485 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Fermt1P59113 677 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 G3bp2P97379 482 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Apba2P98084 750 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Papss1Q60967 624 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 CyldQ80TQ2 952 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Arhgap15Q811M1 481 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Tmem82Q8R115 356 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ophn1Q99J31 802 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Rilpl2Q99LE1 197 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Ap2b1Q9DBG3 937 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Atp13a1Q9EPE9 1200 aaKnown RBP13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 Il21rQ9JHX3 529 aa13.34□□□□□ -0.27
Nup88-203ENSMUST00000108531 QkiQ9QYS9 341 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms