RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Olfr671A0A1B0GSN5 317 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gm13941A2AJ38 245 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr1145A2AVC7 325 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Oog1E9Q5G7 496 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 SmgcF6VRN1 385 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Eci1P42125 289 aaKnown RBP17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Znf365Q8BG89 408 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 StgQ8BM15 349 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Unc45bQ8CGY6 931 aaKnown RBP17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 CoprsQ9CQ13 173 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cul2Q9D4H8 745 aa17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ddx21Q9JIK5 851 aaKnown RBP17.45■□□□□ 0.38
Ctcf-201ENSMUST00000005841 UprtB1AVZ0 310 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 C130060K24RikG3UWA8 416 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Vmn2r39L7N2E5 861 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 RarbP22605 482 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 RxrgP28705 463 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 P2rx3Q3UR32 397 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pcnx4Q3UVY5 1174 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Kif11Q6P9P6 1052 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Znf76Q8BMU0 568 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Klhl2Q8JZP3 593 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Sytl1Q99N80 567 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Hacd2Q9D3B1 254 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Spock2Q9ER58 423 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Spag4Q9JJF2 443 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 VarsQ9Z1Q9 1263 aaKnown RBP17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Lbhd1A0A087WPA0 259 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fam171a2A2A699 822 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dpy19l4A2AJQ3 722 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ifi207E9Q3L4 978 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dpy19l2P0CW70 773 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nr2c2P49117 596 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 McuQ3UMR5 350 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PigaQ64323 485 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tbc1d22bQ80VE5 505 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Q810S2 196 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rhpn2Q8BWR8 686 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 CopaQ8CIE6 1224 aaKnown RBP17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ddx1Q91VR5 740 aaKnown RBP17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nsmce2Q91VT1 247 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Hey2Q9QUS4 339 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pgap3A2A559 320 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Terf1P70371 421 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 NfibP97863 570 aaKnown RBP17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cfhr2Q4LDF6 332 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mief2Q5NCS9 454 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 9930111J21Rik1Q5SVP0 844 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Znf423Q80TS5 1292 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nudcd3Q8R1N4 363 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pcdhb18Q91Y02 792 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Krcc1Q99JT5 256 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Fam227bQ9D518 532 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 MrgbpQ9DAT2 204 aa17.44■□□□□ 0.38
Ctcf-201ENSMUST00000005841 NrapQ80XB4 1728 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Spin2fJ3QPU0 254 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dync1i2O88487 612 aaKnown RBP17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Lhx5P61375 402 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 InhbaQ04998 424 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 DtlQ3TLR7 729 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Armcx5Q3UZB0 606 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tmem151aQ6GQT5 468 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Arhgap28Q8BN58 729 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Smtnl2Q8CI12 456 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Slc36a1Q8K4D3 475 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tagln3Q9R1Q8 199 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Arih1Q9Z1K5 555 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Txnl4aP83877 142 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Serpina6Q06770 397 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cyp3a16Q64481 504 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Chst10Q6PGK7 356 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Lrit1Q8K099 624 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mul1Q8VCM5 352 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Slc39a3Q99K24 317 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Nmd3Q99L48 503 aaKnown RBP17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PllpQ9DCU2 182 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Mpp5Q9JLB2 675 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Osbpl8B9EJ86 889 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Bmpr2O35607 1038 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Gja8P28236 440 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 LdlrP35951 862 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PklrP53657 574 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Npr3P70180 536 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 InipQ3TXT3 104 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 GpamQ61586 827 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Tas2r102Q7M717 329 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Cnot6Q8K3P5 557 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 MajinQ9D992 256 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Leng1Q9DB98 261 aa17.43■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Armt1A6H630 439 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Pi4k2aQ2TBE6 479 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Zfp759Q7M6X3 721 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Olfr792Q7TRH9 311 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Ablim1Q8K4G5 861 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Akap8lQ9R0L7 642 aaKnown RBP17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 ZfrO88532 1074 aaKnown RBP17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Atp6v0d1P51863 351 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 PighQ5M9N4 188 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Dyrk4Q8BI55 632 aa17.42■□□□□ 0.38
Ctcf-201ENSMUST00000005841 Rsl1d1Q8BVY0 452 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms